Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.6e-211 737.6 377 100.0
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 6.3e-192 674.1 346 98.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 8.0e-171 604.0 347 87.3
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 7.8e-142 507.7 365 73.2
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.3e-136 490.3 341 74.5
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 4.6e-118 428.7 365 65.8
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 6.7e-77 292.0 349 49.3
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.7e-67 260.8 351 45.9
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.0e-65 253.8 348 44.3
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 7.7e-65 251.9 334 45.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 3.6e-62 243.0 330 44.2
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 8.0e-62 241.9 353 43.3
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 3.0e-61 240.0 329 45.0
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 8.8e-61 238.4 337 44.2
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 2.0e-60 237.3 331 43.8
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 4.4e-60 236.1 348 41.7
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 7.5e-60 235.3 320 45.0
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 8.2e-59 231.9 350 42.3
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.8e-58 230.7 329 43.2
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.6e-57 227.6 335 42.4
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.5e-57 226.5 338 43.5
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 3.5e-57 226.5 331 43.2
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 4.5e-57 226.1 343 42.6
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 4.5e-57 226.1 330 41.8
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.9e-56 223.4 333 41.7
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 5.0e-56 222.6 327 44.6
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 8.5e-56 221.9 357 40.3
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 7.2e-55 218.8 353 44.2
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 8.0e-54 215.3 327 41.0
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.0e-53 213.4 339 38.6
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 5.2e-53 212.6 333 39.6
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 8.8e-53 211.8 357 42.0
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 6.3e-51 205.7 315 42.2
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 3.1e-50 203.4 319 42.6
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 2.2e-48 197.2 326 37.7
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 6.5e-48 195.7 348 37.4
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 3.2e-47 193.4 342 39.5
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 2.8e-46 190.3 343 38.2
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 4.7e-46 189.5 315 40.6
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.0e-45 188.3 383 35.8
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.5e-44 184.5 322 36.6
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 2.0e-44 184.1 282 42.6
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 3.4e-44 183.3 170 56.5
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 4.4e-44 183.0 196 52.0
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.7e-44 182.6 327 36.1
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 3.7e-43 179.9 329 35.6
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 6.3e-43 179.1 311 38.6
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.1e-42 178.3 327 36.7
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.4e-42 177.9 321 36.8
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.2e-41 174.9 318 38.1
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.2e-41 174.9 305 38.4
PGSC0003DMG402010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 1.6e-41 174.5 93 96.8
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.7e-41 173.7 391 34.0
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 5.9e-41 172.6 309 38.5
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.9e-41 172.6 309 38.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 7.8e-41 172.2 318 36.2
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.3e-40 170.6 173 52.6
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 2.9e-40 170.2 230 44.3
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.0e-40 169.5 321 34.6
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.6e-40 168.7 309 38.2
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 4.3e-39 166.4 342 35.4
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 1.2e-38 164.9 310 37.7
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 3.6e-38 163.3 374 34.0
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 3.6e-38 163.3 180 47.8
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.1e-38 162.5 307 37.5
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.4e-37 161.4 308 37.0
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 4.0e-37 159.8 328 34.8
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 4.0e-37 159.8 318 36.5
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 3.4e-36 156.8 319 34.5
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 4.4e-36 156.4 356 35.4
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 5.7e-36 156.0 370 31.6
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 7.0e-34 149.1 285 36.8
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.5e-33 146.7 128 57.8
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.0e-32 145.2 298 35.2
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.0e-32 145.2 309 33.0
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.3e-32 144.1 341 32.6
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.5e-31 140.6 93 68.8
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 2.8e-30 137.1 374 33.7
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 7.5e-28 129.0 384 28.9
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 4.9e-27 126.3 271 35.1
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 1.9e-26 124.4 133 50.4
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.2e-26 123.6 308 33.1
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 9.8e-20 102.1 154 37.0
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 6.4e-19 99.4 251 30.3
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 1.2e-17 95.1 132 44.7
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 1.0e-16 92.0 319 29.2
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.7e-16 91.3 142 42.3
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 3.3e-15 87.0 51 86.3
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 4.4e-12 76.6 172 32.0
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.1e-09 67.8 106 36.8
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.3e-08 65.1 88 42.0
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 3.3e-07 60.5 147 31.3


User provided reference genes

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