Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 1.8e-179 632.5 331 100.0
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 5.3e-102 375.2 198 98.5
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 3.1e-94 349.4 198 89.4
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 2.3e-89 333.2 198 86.9
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 3.7e-87 325.9 303 62.4
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 1.5e-80 303.9 198 79.3
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.8e-78 297.0 198 75.3
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.8e-78 297.0 198 75.3
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 1.8e-78 297.0 198 75.3
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 3.1e-78 296.2 198 74.2
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 4.1e-78 295.8 198 75.3
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 9.1e-78 294.7 198 74.7
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 1.6e-77 293.9 198 75.3
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 1.3e-76 290.8 198 75.8
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 1.7e-76 290.4 198 75.3
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 2.5e-75 286.6 198 76.3
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 3.2e-75 286.2 194 76.3
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 3.2e-75 286.2 198 73.7
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 3.2e-75 286.2 198 73.7
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 3.2e-75 286.2 197 75.6
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 7.2e-75 285.0 197 74.6
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 1.2e-74 284.3 198 72.7
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 1.2e-74 284.3 198 72.7
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 1.6e-74 283.9 197 76.1
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 2.1e-74 283.5 197 74.1
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 3.6e-74 282.7 198 70.2
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 4.7e-74 282.3 197 73.6
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 4.7e-74 282.3 198 72.7
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 4.7e-74 282.3 198 74.7
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 6.1e-74 282.0 198 72.2
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 1.0e-73 281.2 198 71.7
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 2.3e-73 280.0 197 75.1
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 8.8e-73 278.1 212 71.2
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 8.8e-73 278.1 197 71.6
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 4.4e-72 275.8 200 69.5
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 4.8e-71 272.3 198 72.7
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 8.2e-71 271.6 198 70.2
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 1.4e-70 270.8 196 72.4
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 1.8e-70 270.4 201 68.7
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 4.1e-70 269.2 241 62.2
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 2.7e-69 266.5 198 70.7
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 3.5e-69 266.2 198 69.2
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 4.5e-69 265.8 198 69.7
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 5.9e-69 265.4 198 68.7
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 5.9e-69 265.4 198 69.7
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 1.7e-68 263.8 233 61.8
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 2.2e-68 263.5 198 69.2
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 2.2e-68 263.5 198 68.2
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 5.0e-68 262.3 198 68.2
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 8.5e-68 261.5 198 68.2
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 1.1e-67 261.2 221 67.4
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 5.5e-67 258.8 198 67.2
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 7.2e-67 258.5 198 66.7
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 2.1e-66 256.9 197 67.5
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 4.7e-66 255.8 197 67.0
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 4.7e-66 255.8 197 67.0
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 4.7e-66 255.8 198 68.2
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 1.4e-65 254.2 198 66.7
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 6.8e-65 251.9 198 65.7
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 6.8e-65 251.9 198 66.2
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 4.4e-64 249.2 198 67.7
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 3.7e-63 246.1 201 64.7
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 1.4e-62 244.2 198 65.2
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.2e-61 241.1 193 64.8
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 1.6e-61 240.7 204 62.3
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 7.7e-61 238.4 198 63.1
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 7.7e-61 238.4 198 63.1
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 1.3e-60 237.7 198 63.6
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 1.7e-60 237.3 198 63.6
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 1.7e-60 237.3 200 62.5
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 2.9e-60 236.5 198 65.7
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 3.8e-60 236.1 198 63.1
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 5.0e-60 235.7 196 63.8
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 5.0e-60 235.7 198 62.1
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 8.5e-60 235.0 198 62.6
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 4.2e-59 232.6 176 71.0
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 2.1e-58 230.3 198 61.1
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 2.7e-58 229.9 198 61.1
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 6.1e-58 228.8 198 60.6
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 6.1e-58 228.8 198 60.6
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 2.6e-56 223.4 198 61.1
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 1.1e-54 218.0 198 60.6
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.4e-54 216.9 198 59.1
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 3.1e-54 216.5 198 59.1
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 3.1e-54 216.5 198 59.1
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 7.0e-54 215.3 182 63.7
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 1.3e-52 211.1 198 57.6
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 1.2e-50 204.5 197 56.3
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 1.6e-50 204.1 197 57.9
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 2.1e-50 203.8 198 58.1
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 3.6e-50 203.0 199 53.8
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 6.8e-49 198.7 198 54.0
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 8.9e-49 198.4 180 62.2
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 5.4e-46 189.1 203 51.2
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 2.3e-44 183.7 202 50.0
TPR.G29244 Trifolium pratense HOM05D005803 ORTHO05D008090 2.5e-43 180.3 161 62.7
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 4.9e-39 166.0 206 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 2.4e-38 163.7 199 48.2
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 1.7e-36 157.5 207 42.5
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.7e-36 157.5 217 48.4
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 5.4e-30 136.0 198 42.4
AL92U10050 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 9.5e-27 125.2 131 55.7
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 9.5e-27 125.2 90 68.9
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 2.6e-24 117.1 187 41.7
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 1.7e-23 114.4 68 79.4
Hma1.2p1_2251F.1_g318130 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 3.9e-20 103.2 130 48.5
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 3.1e-17 93.6 69 63.8
SEGI_29512 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 2.4e-14 84.0 81 56.8
SEGI_04834 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 5.4e-06 56.2 47 53.2


User provided reference genes

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