Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 2.3e-114 415.6 219 100.0
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 2.4e-95 352.4 185 98.9
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 2.7e-86 322.4 225 79.6
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.3e-75 287.0 224 73.7
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 9.0e-74 280.8 227 70.5
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.1e-63 247.3 198 68.7
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.0e-36 156.8 225 44.0
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 7.7e-33 144.8 217 45.6
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 1.7e-32 143.7 225 42.7
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 7.2e-31 138.3 206 41.3
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 3.0e-29 132.9 220 41.4
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 5.2e-29 132.1 221 36.2
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 2.4e-26 123.2 231 39.0
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 9.1e-26 121.3 203 44.3
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.2e-24 116.7 217 38.7
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 2.2e-24 116.7 193 37.8
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 3.8e-24 115.9 159 50.3
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 6.1e-22 108.6 147 46.9
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 1.0e-21 107.8 199 36.2
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 5.2e-21 105.5 224 34.8
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 3.4e-20 102.8 199 40.2
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 4.4e-20 102.4 174 36.8
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 9.8e-20 101.3 202 37.1
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 1.3e-19 100.9 196 37.8
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 6.3e-19 98.6 197 38.6
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 1.4e-18 97.4 171 39.2
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.4e-18 97.4 183 38.8
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 2.4e-18 96.7 180 41.1
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 3.1e-18 96.3 189 38.6
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 1.2e-17 94.4 173 42.8
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 3.5e-17 92.8 154 37.7
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 6.5e-16 88.6 174 38.5
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 3.2e-15 86.3 219 33.3
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.2e-14 84.3 174 36.8
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 2.1e-14 83.6 171 36.8
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 2.8e-14 83.2 155 37.4
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 3.0e-13 79.7 176 34.1
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 4.0e-13 79.3 182 36.3
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 1.7e-11 73.9 146 39.0
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 4.1e-10 69.3 138 35.5
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 7.0e-10 68.6 173 28.9
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 7.0e-10 68.6 252 27.4
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 9.2e-10 68.2 130 37.7
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 9.5e-07 58.2 99 39.4
Peaxi162Scf00961g00117 Petunia axillaris HOM05D000670 ORTHO05D000529 6.1e-06 55.5 178 27.5


User provided reference genes

Program Settings