Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g067290.3 Solanum lycopersicum HOM05D006883 ORTHO05D008624 4.9e-108 394.4 192 100.0
PGSC0003DMG400022678 Solanum tuberosum HOM05D006883 ORTHO05D008624 1.2e-106 389.8 192 98.4
Sopen01g029090 Solanum pennellii HOM05D006883 ORTHO05D008624 1.6e-106 389.4 192 98.4
CAN.G556.8 Capsicum annuum HOM05D006883 ORTHO05D008624 8.6e-105 383.6 192 96.4
Nitab4.5_0000829g0010 Nicotiana tabacum HOM05D006883 ORTHO05D008624 2.4e-102 375.6 192 94.3
Nitab4.5_0002986g0100 Nicotiana tabacum HOM05D006883 ORTHO05D008624 2.4e-102 375.6 192 94.3
Peaxi162Scf00386g00096 Petunia axillaris HOM05D006883 ORTHO05D008624 2.0e-101 372.5 192 93.2
Gorai.011G186200 Gossypium raimondii HOM05D006883 ORTHO05D008624 2.7e-98 362.1 192 91.1
Manes.15G016500 Manihot esculenta HOM05D006883 ORTHO05D008624 3.5e-98 361.7 192 90.6
Lj6P670T41 Lonicera japonica HOM05D006883 ORTHO05D008624 6.0e-98 360.9 192 90.6
Cc03_g02320 Coffea canephora HOM05D006883 ORTHO05D008624 1.3e-97 359.8 192 89.1
DCAR_030562 Daucus carota HOM05D006883 ORTHO05D008624 1.3e-97 359.8 192 89.1
Gohir.D10G166900 Gossypium hirsutum HOM05D006883 ORTHO05D008624 1.7e-97 359.4 192 90.6
Ciclev10005043m.g Citrus clementina HOM05D006883 ORTHO05D008624 3.0e-97 358.6 192 90.1
DCAR_030558 Daucus carota HOM05D006883 ORTHO05D008624 3.0e-97 358.6 192 88.5
Gohir.A10G101275 Gossypium hirsutum HOM05D006883 ORTHO05D008624 3.0e-97 358.6 192 90.1
Glyma.13G215400 Glycine max HOM05D006883 ORTHO05D008624 5.1e-97 357.8 192 89.6
Aqoxy2G03105 Aquilegia oxysepala HOM05D006883 ORTHO05D008624 6.6e-97 357.5 192 89.1
Lalb_Chr15g0087031 Lupinus albus HOM05D006883 ORTHO05D008624 1.1e-96 356.7 192 88.5
Glyma.15G097700 Glycine max HOM05D006883 ORTHO05D008624 1.5e-96 356.3 192 89.6
MD13G1173600 Malus domestica HOM05D006883 ORTHO05D008624 1.9e-96 355.9 192 87.5
Nn4g26002 Nelumbo nucifera HOM05D006883 ORTHO05D008624 1.9e-96 355.9 192 88.5
CANSAT78G0922 Cannabis sativa HOM05D006883 ORTHO05D008624 2.5e-96 355.5 192 89.1
Prupe.1G141800 Prunus persica HOM05D006883 ORTHO05D008624 2.5e-96 355.5 192 88.0
FAN17G0491 Fragaria x ananassa HOM05D006883 ORTHO05D008624 4.3e-96 354.8 192 88.0
Thecc.04G278100 Theobroma cacao HOM05D006883 ORTHO05D008624 4.3e-96 354.8 192 89.1
RcHm_v2.0_Chr4g0421151 Rosa chinensis HOM05D006883 ORTHO05D008624 5.6e-96 354.4 192 88.0
QL06p007513 Quercus lobata HOM05D006883 ORTHO05D008624 7.3e-96 354.0 191 88.5
FvH4_4g17240 Fragaria vesca HOM05D006883 ORTHO05D008624 9.6e-96 353.6 192 87.5
FAN12G0993 Fragaria x ananassa HOM05D006883 ORTHO05D008624 9.6e-96 353.6 192 87.5
FAN12G3260 Fragaria x ananassa HOM05D006883 ORTHO05D008624 9.6e-96 353.6 192 87.5
FAN22G2222 Fragaria x ananassa HOM05D006883 ORTHO05D008624 9.6e-96 353.6 192 87.5
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 1.2e-95 353.2 192 88.5
Lalb_Chr18g0055701 Lupinus albus HOM05D006883 ORTHO05D008624 1.6e-95 352.8 192 88.5
Cfa015347 Carpinus fangiana HOM05D006883 ORTHO05D008624 2.8e-95 352.1 192 89.1
CSS0008645 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 3.6e-95 351.7 192 86.5
AUR62041764 Chenopodium quinoa HOM05D006883 ORTHO05D008624 4.7e-95 351.3 192 88.0
Oeu044787.1 Olea europaea HOM05D006883 ORTHO05D008624 4.7e-95 351.3 192 87.5
Sed0024317 Sechium edule HOM05D006883 ORTHO05D008624 4.7e-95 351.3 192 88.0
arahy.Tifrunner.gnm1.ann1.WI0ZBZ Arachis hypogaea HOM05D006883 ORTHO05D008624 6.2e-95 350.9 192 89.6
Haze_01264 Corylus avellana HOM05D006883 ORTHO05D008624 6.2e-95 350.9 192 88.5
Phvul.006G161600 Phaseolus vulgaris HOM05D006883 ORTHO05D008624 6.2e-95 350.9 192 88.0
CiPaw.02G086300 Carya illinoinensis HOM05D006883 ORTHO05D008624 8.1e-95 350.5 192 88.5
Actinidia40226 Actinidia chinensis HOM05D006883 ORTHO05D008624 1.4e-94 349.7 193 87.6
arahy.Tifrunner.gnm1.ann1.GN2N7N Arachis hypogaea HOM05D006883 ORTHO05D008624 1.4e-94 349.7 192 89.1
Ah.06g192160 Amaranthus hybridus HOM05D006883 ORTHO05D008624 1.8e-94 349.4 192 87.5
MELO3C006606.2 Cucumis melo HOM05D006883 ORTHO05D008624 2.4e-94 349.0 192 85.9
LjContig00389g0025618 Lotus japonicus HOM05D006883 ORTHO05D008624 2.4e-94 349.0 192 88.0
Rhsim04G0216600 Rhododendron simsii HOM05D006883 ORTHO05D008624 2.4e-94 349.0 192 86.5
MSTRG.10057 Avicennia marina HOM05D006883 ORTHO05D008624 3.1e-94 348.6 192 86.5
PGR004G1631 Punica granatum HOM05D006883 ORTHO05D008624 3.1e-94 348.6 192 85.9
SalBow2G1088 Salvia bowleyana HOM05D006883 ORTHO05D008624 4.0e-94 348.2 192 86.5
TAR633G1607 Trochodendron aralioides HOM05D006883 ORTHO05D008624 5.2e-94 347.8 192 87.0
CsaV3_3G014130 Cucumis sativus L. HOM05D006883 ORTHO05D008624 6.9e-94 347.4 192 85.9
Sabra08G0157100 Salix brachista HOM05D006883 ORTHO05D008624 6.9e-94 347.4 192 85.9
COL.COLO4_13924 Corchorus olitorius HOM05D006883 ORTHO05D008624 9.0e-94 347.1 190 89.5
Psat1g187280 Pisum sativum HOM05D006883 ORTHO05D008624 9.0e-94 347.1 192 85.9
Potri.008G204900 Populus trichocarpa HOM05D006883 ORTHO05D008624 9.0e-94 347.1 192 86.5
Medtr2g020160 Medicago truncatula HOM05D006883 ORTHO05D008624 1.5e-93 346.3 192 87.0
Sc25g0004770 Simmondsia chinensis HOM05D006883 ORTHO05D008624 1.5e-93 346.3 192 85.4
Migut.G00206 Erythranthe guttata HOM05D006883 ORTHO05D008624 2.0e-93 345.9 192 86.5
vmacro08200 Vaccinium macrocarpon HOM05D006883 ORTHO05D008624 2.0e-93 345.9 192 85.4
Ca_00572_v3 Cicer arietinum L. HOM05D006883 ORTHO05D008624 2.6e-93 345.5 192 84.9
TWI53G1857 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 3.4e-93 345.1 192 85.4
Eucgr.H03771 Eucalyptus grandis HOM05D006883 ORTHO05D008624 5.8e-93 344.4 192 85.9
PSO170G0113 Papaver somniferum HOM05D006883 ORTHO05D008624 5.8e-93 344.4 192 85.4
PSO210G3900 Papaver somniferum HOM05D006883 ORTHO05D008624 5.8e-93 344.4 192 85.4
TWI53G0676 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 5.8e-93 344.4 192 85.4
Duzib052G0675 Durio zibethinus HOM05D006883 ORTHO05D008624 9.9e-93 343.6 192 85.9
Actinidia23426 Actinidia chinensis HOM05D006883 ORTHO05D008624 2.9e-92 342.0 193 86.0
Lsat_1_v5_gn_3_24840 Lactuca sativa HOM05D006883 ORTHO05D008624 2.9e-92 342.0 192 84.9
HanXRQChr08g0208101 Helianthus annuus HOM05D006883 ORTHO05D008624 3.8e-92 341.7 192 83.9
THA.LOC104802726 Tarenaya hassleriana HOM05D006883 ORTHO05D008624 1.1e-91 340.1 189 84.7
ECA246G3623 Erigeron canadensis HOM05D006883 ORTHO05D008624 1.4e-91 339.7 192 84.9
AUR62041032 Chenopodium quinoa HOM05D006883 ORTHO05D008624 3.2e-91 338.6 192 84.4
MBI19_g30852_MAGBIO Magnolia biondii HOM05D006883 ORTHO05D008624 1.2e-90 336.7 192 83.3
Atru.BG.87.p Acer truncatum HOM05D006883 ORTHO05D008624 2.1e-90 335.9 191 86.9
Aa31LG11G10960 Aethionema arabicum HOM05D006883 ORTHO05D008624 6.0e-90 334.3 188 84.6
Dinv38322 Davidia involucrata HOM05D006883 ORTHO05D008624 2.3e-89 332.4 175 90.3
CARHR194360 Cardamine hirsuta HOM05D006883 ORTHO05D008624 3.9e-89 331.6 183 84.7
Thhalv10013668m.g Eutrema salsugineum HOM05D006883 ORTHO05D008624 5.1e-89 331.3 183 84.7
CDE11G0693 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 1.5e-88 329.7 192 82.3
CDE02G1591 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 3.3e-88 328.6 192 81.8
ATR0706G234 Amborella trichopoda HOM05D006883 ORTHO05D008624 9.6e-88 327.0 192 77.6
AL6G29930 Arabidopsis lyrata HOM05D006883 ORTHO05D008624 9.6e-88 327.0 184 83.2
AT5G18660 Arabidopsis thaliana HOM05D006883 ORTHO05D008624 9.6e-88 327.0 184 83.2
Sp6g25680 Schrenkiella parvula HOM05D006883 ORTHO05D008624 2.8e-87 325.5 184 82.1
SEGI_20295 Sequoiadendron giganteum HOM05D006883 ORTHO05D008624 2.8e-87 325.5 192 78.6
Carub.0006s1695 Capsella rubella HOM05D006883 ORTHO05D008624 4.8e-87 324.7 183 82.5
BcaC04g18657 Brassica carinata HOM05D006883 ORTHO05D008624 8.1e-87 323.9 184 81.5
BolC9t58650H Brassica oleracea HOM05D006883 ORTHO05D008624 8.1e-87 323.9 184 81.5
DCAR_030560 Daucus carota HOM05D006883 ORTHO05D008624 1.4e-86 323.2 192 82.3
unitig_748.g8372 Utricularia gibba HOM05D006883 ORTHO05D008624 1.8e-86 322.8 192 79.2
EL10Ac4g09099 Beta vulgaris HOM05D006883 ORTHO05D008624 2.4e-86 322.4 178 86.5
BcaB08g36654 Brassica carinata HOM05D006883 ORTHO05D008624 2.4e-86 322.4 184 81.0
A10p20920 Brassica napus HOM05D006883 ORTHO05D008624 4.0e-86 321.6 183 81.4
C09p57810 Brassica napus HOM05D006883 ORTHO05D008624 4.0e-86 321.6 182 81.9
BraA10t44156Z Brassica rapa HOM05D006883 ORTHO05D008624 4.0e-86 321.6 183 81.4
Zm00001eb016830 Zea mays HOM05D006883 ORTHO05D008624 7.6e-85 317.4 190 77.9
Mapoly0058s0049 Marchantia polymorpha HOM05D006883 ORTHO05D008624 1.3e-84 316.6 184 79.3
Os03g0351200 Oryza sativa ssp. japonica HOM05D006883 ORTHO05D008624 1.3e-84 316.6 190 77.4
AagrBONN_evm.TU.Sc2ySwM_369.460 Anthoceros agrestis HOM05D006883 ORTHO05D008624 2.4e-83 312.4 190 77.9
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 7.1e-83 310.8 199 76.4
Pp3c7_3620 Physcomitrium patens HOM05D006883 ORTHO05D008624 1.1e-80 303.5 184 77.7
HPP92_006930 Vanilla planifolia HOM05D006883 ORTHO05D008624 1.5e-80 303.1 190 72.1
SGA_v2.0_scaffold973G53763 Striga asiatica HOM05D006883 ORTHO05D008624 3.3e-80 302.0 177 79.1
CBR_g77624 Chara braunii HOM05D006883 ORTHO05D008624 1.1e-78 297.0 190 70.5
CSS0011936 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 1.7e-76 289.7 177 73.4
CSS0009780 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 3.8e-76 288.5 177 72.9
SMO174G0102 Selaginella moellendorffii HOM05D006883 ORTHO05D008624 6.9e-70 267.7 181 69.6
MCO03G528 Micromonas commoda HOM05D006883 ORTHO05D008624 1.8e-65 253.1 190 63.2
Cre01.g042800 Chlamydomonas reinhardtii HOM05D006883 ORTHO05D008624 8.7e-65 250.8 181 61.9
Cpa.g.sc1008.1 Carica papaya HOM05D006883 ORTHO05D008624 2.5e-43 179.5 90 94.4
Oeu061954.1 Olea europaea HOM05D006883 ORTHO05D008624 3.6e-34 149.1 120 65.0
PRCOL_00006445 Prasinoderma coloniale HOM05D006883 ORTHO05D008624 2.3e-33 146.4 190 41.1


User provided reference genes

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