Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 1.7e-157 559.3 288 100.0
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 3.3e-116 422.2 288 78.5
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.6e-97 359.4 285 70.5
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.3e-92 342.0 270 71.5
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 3.0e-85 319.3 233 75.1
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.4e-81 305.8 245 70.2
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-76 290.4 216 74.1
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.5e-63 246.5 279 57.0
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 1.2e-62 244.2 204 64.7
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.8e-59 233.0 165 77.6
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.0e-56 224.6 158 76.6
Solyc07g041360.1 Solanum lycopersicum HOM05D003617 ORTHO05D007165 8.8e-53 211.5 139 81.3
PGSC0003DMG400034694 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-48 196.1 169 65.1
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-45 185.3 171 64.3
CAN.G1451.2 Capsicum annuum HOM05D003617 ORTHO05D007165 4.5e-41 172.6 282 45.4
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.5e-40 168.7 115 77.4
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 8.3e-35 151.8 225 40.0
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 1.8e-34 150.6 247 40.1
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 5.4e-34 149.1 225 40.4
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 2.7e-33 146.7 224 40.2
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 1.0e-32 144.8 223 39.0
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 4.3e-31 139.4 223 38.1
PGSC0003DMG400017900 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.3e-31 139.4 138 59.4
PGSC0003DMG400036438 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.2e-29 132.5 118 60.2
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 9.8e-28 128.3 225 36.0
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 4.9e-27 125.9 221 36.2
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-26 122.5 231 37.2
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-25 119.4 224 36.2
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-25 119.4 290 32.8
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.0e-24 115.9 290 32.8
CAN.G135.75 Capsicum annuum HOM05D003617 ORTHO05D007165 8.6e-24 115.2 214 40.2
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.6e-23 112.5 290 32.1
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 9.5e-23 111.7 170 37.6
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-20 102.8 236 33.1
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.5e-20 102.1 247 32.0
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-19 100.1 184 37.0
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-19 99.8 238 32.8
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.3e-19 98.6 242 31.0
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-18 97.8 294 30.6
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-18 97.1 196 36.2
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.0e-18 95.5 202 33.2
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.2e-18 95.1 272 29.0
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-17 94.4 238 30.3
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.0e-17 92.4 184 35.3
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.8e-17 92.0 170 35.3
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.3e-16 91.3 166 38.0
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 1.7e-16 90.9 127 41.7
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.0e-16 89.4 171 36.3
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.6e-16 88.6 228 29.4
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-15 88.2 185 34.6
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-15 88.2 198 32.3
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.1e-15 88.2 140 38.6
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-15 87.0 244 28.3
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 2.5e-15 87.0 114 41.2
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.5e-15 87.0 169 34.9
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-15 86.7 179 31.8
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-15 86.7 190 32.1
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.6e-15 85.9 259 29.3
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.6e-15 85.9 169 34.3
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-14 84.3 209 32.1
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.0e-13 79.7 238 29.4
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.2e-13 79.3 158 34.2
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 6.8e-13 79.0 121 36.4
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.9e-13 78.6 181 31.5
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.9e-13 78.6 238 29.0
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-12 77.8 195 31.8
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-12 77.8 170 33.5
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-12 77.0 200 31.5
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-12 76.3 223 29.6
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 5.8e-12 75.9 211 28.0
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.8e-12 75.1 114 38.6
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-11 74.7 195 31.3
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-11 74.3 236 30.9
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 2.2e-11 73.9 147 36.7
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-10 70.9 152 36.2
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 1.9e-10 70.9 239 25.9
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.1e-10 68.9 238 28.2
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 9.2e-10 68.6 160 31.2
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.8e-09 65.5 207 22.2
CAN.G810.1 Capsicum annuum HOM05D003617 ORTHO05D007165 3.0e-08 63.5 108 35.2
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 3.9e-08 63.2 112 35.7
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-07 61.6 202 21.8
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-07 60.8 111 33.3
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 3.3e-07 60.1 208 26.0
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-07 59.7 71 40.8
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.3e-07 58.9 149 30.9
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.5e-07 58.5 175 29.7


User provided reference genes

Program Settings