Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g066775.1 Solanum lycopersicum HOM05D000017 ORTHO05D013173 4.0e-102 375.2 251 100.0
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-25 120.6 141 50.4
PGSC0003DMG400010979 Solanum tuberosum HOM05D003373 ORTHO05D013173 4.1e-22 109.4 135 50.4
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 8.6e-20 101.7 120 52.5
PGSC0003DMG400027496 Solanum tuberosum HOM05D000017 ORTHO05D013173 5.9e-13 79.0 216 44.4
PGSC0003DMG400020379 Solanum tuberosum HOM05D000017 ORTHO05D009364 2.3e-12 77.0 84 52.4
Sopen03g024810 Solanum pennellii HOM05D000017 ORTHO05D001349 8.6e-12 75.1 76 51.3
Sopen12g007590 Solanum pennellii HOM05D000017 ORTHO05D001349 3.3e-11 73.2 132 37.9
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.3e-11 72.8 153 36.6
PGSC0003DMG400002554 Solanum tuberosum HOM05D000017 ORTHO05D009364 4.3e-11 72.8 89 46.1
Nitab4.5_0000768g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.5e-11 71.6 140 34.3
Nitab4.5_0010257g0010 Nicotiana tabacum HOM05D000017 ORTHO05D015725 1.2e-10 71.2 130 39.2
Solyc01g111480.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.2e-10 71.2 117 38.5
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-10 70.9 117 38.5
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-10 70.9 117 38.5
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-10 70.9 117 38.5
Solyc02g031730.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.1e-10 70.5 59 55.9
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 2.8e-10 70.1 118 37.3
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 3.6e-10 69.7 59 55.9
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 3.6e-10 69.7 117 37.6
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-10 69.7 117 37.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-10 69.7 117 37.6
Nitab4.5_0000147g0090 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.2e-10 68.9 141 34.0
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 6.2e-10 68.9 59 55.9
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 6.2e-10 68.9 59 55.9
Nitab4.5_0000426g0250 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.0e-10 68.6 146 33.6
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-10 68.6 117 37.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-10 68.6 117 37.6
Nitab4.5_0000058g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.0e-09 68.2 164 34.1
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-09 67.8 158 32.9
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-09 67.8 105 38.1
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 1.4e-09 67.8 158 32.9
Nitab4.5_0000923g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.8e-09 67.4 168 34.5
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.8e-09 67.4 159 32.7
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.8e-09 67.4 150 33.3
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 1.8e-09 67.4 161 32.3
Nitab4.5_0004706g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.3e-09 67.0 161 31.1
Nitab4.5_0009005g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.0e-09 66.2 48 56.2
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.2e-09 65.9 126 36.5
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.8e-09 65.5 117 40.2
Solyc02g062435.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 6.8e-09 65.5 45 62.2
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 6.8e-09 65.5 150 34.0
Sopen09g007720 Solanum pennellii HOM05D000017 ORTHO05D009364 6.8e-09 65.5 59 52.5
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.9e-09 65.1 146 32.9
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 1.2e-08 64.7 53 56.6
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-08 64.3 143 32.2
Nitab4.5_0022073g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-08 64.3 146 33.6
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 1.5e-08 64.3 76 46.1
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 1.5e-08 64.3 158 34.2
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.0e-08 63.9 145 32.4
Nitab4.5_0005049g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.0e-08 63.9 103 37.9
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 2.0e-08 63.9 156 31.4
Nitab4.5_0001610g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.6e-08 63.5 147 32.0
Nitab4.5_0008808g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.6e-08 63.5 49 53.1
Nitab4.5_0003187g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.4e-08 63.2 49 57.1
Sopen01g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 63.2 52 46.2
Sopen03g017700 Solanum pennellii HOM05D000017 ORTHO05D001349 3.4e-08 63.2 56 53.6
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 3.4e-08 63.2 53 52.8
Nitab4.5_0001038g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.4e-08 62.8 135 33.3
Nitab4.5_0004903g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.4e-08 62.8 143 32.2
Sopen03g007840 Solanum pennellii HOM05D000017 ORTHO05D000013 4.4e-08 62.8 61 49.2
Sopen11g024060 Solanum pennellii HOM05D000017 ORTHO05D009364 4.4e-08 62.8 58 53.4
Nitab4.5_0001276g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.8e-08 62.4 65 46.2
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.8e-08 62.4 95 41.1
Sopen01g006290 Solanum pennellii HOM05D000017 ORTHO05D013101 5.8e-08 62.4 158 32.9
Nitab4.5_0006039g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.5e-08 62.0 146 32.2
Nitab4.5_0000129g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.8e-08 61.6 111 35.1
Sopen11g011240 Solanum pennellii HOM05D000017 ORTHO05D001349 9.8e-08 61.6 51 52.9
Nitab4.5_0001219g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.3e-07 61.2 133 35.3
Nitab4.5_0001784g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.3e-07 61.2 130 31.5
Solyc10g018207.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.3e-07 61.2 57 50.9
Nitab4.5_0010397g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-07 60.8 47 53.2
Nitab4.5_0012769g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.2e-07 60.5 188 28.7
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 2.9e-07 60.1 136 35.3
Nitab4.5_0003883g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.7e-07 59.7 77 41.6
Nitab4.5_0005112g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.7e-07 59.7 177 31.6
Nitab4.5_0000052g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.9e-07 59.3 81 40.7
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.9e-07 59.3 153 30.7
Nitab4.5_0003938g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 4.9e-07 59.3 155 31.6
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 4.9e-07 59.3 144 31.9
Nitab4.5_0002006g0120 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.4e-07 58.9 47 53.2
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 6.4e-07 58.9 124 35.5
PGSC0003DMG400039650 Solanum tuberosum HOM05D000017 ORTHO05D013101 6.4e-07 58.9 63 46.0
Nitab4.5_0012220g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.3e-07 58.5 53 47.2
Solyc03g096305.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 8.3e-07 58.5 41 63.4
Nitab4.5_0002469g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.4e-06 57.0 154 27.9
Nitab4.5_0005529g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.4e-06 57.0 94 41.5
Sopen09g008710 Solanum pennellii HOM05D000006 ORTHO05D000001 2.4e-06 57.0 56 48.2
PGSC0003DMG400023085 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.4e-06 57.0 53 49.1
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.4e-06 57.0 53 49.1
Nitab4.5_0006080g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.2e-06 56.6 47 51.1
Peaxi162Scf00290g00112 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-06 56.6 124 32.3
Peaxi162Scf00448g00049 Petunia axillaris HOM05D000017 ORTHO05D009364 3.2e-06 56.6 80 37.5
Sopen10g023000 Solanum pennellii HOM05D000047 ORTHO05D000044 3.2e-06 56.6 39 71.8
Nitab4.5_0000685g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.1e-06 56.2 171 29.8
Solyc05g047645.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 4.1e-06 56.2 56 48.2
Sopen03g017650 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-06 56.2 56 48.2
Sopen04g018010 Solanum pennellii HOM05D000017 ORTHO05D001349 4.1e-06 56.2 56 48.2
Sopen05g030950 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-06 56.2 56 48.2
Sopen11g009200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-06 56.2 56 48.2
Sopen12g009320 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 56.2 56 48.2
PGSC0003DMG400005809 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.1e-06 56.2 66 53.0
Peaxi162Scf00068g02417 Petunia axillaris HOM05D000017 ORTHO05D030244 5.4e-06 55.8 163 28.8
Peaxi162Scf00363g00519 Petunia axillaris HOM05D000017 ORTHO05D009364 5.4e-06 55.8 104 36.5
Nitab4.5_0002569g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.0e-06 55.5 56 48.2
Nitab4.5_0003518g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.2e-06 55.1 87 39.1
Nitab4.5_0008303g0020 Nicotiana tabacum HOM05D000017 ORTHO05D286247 9.2e-06 55.1 136 35.3


User provided reference genes

Program Settings