Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 1.1e-57 226.5 117 100.0
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 1.1e-57 226.5 117 100.0
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 4.2e-54 214.5 117 94.0
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 3.1e-49 198.4 117 87.2
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.3e-47 193.0 116 83.6
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 8.5e-47 190.3 116 81.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.2e-43 179.9 133 70.7
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 1.7e-39 166.0 113 71.7
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 5.5e-38 161.0 111 72.1
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 5.5e-38 161.0 113 69.0
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 9.5e-38 160.2 113 70.8
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 9.5e-38 160.2 113 67.3
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 6.1e-37 157.5 111 70.3
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.4e-36 156.4 114 67.5
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.4e-36 156.4 113 68.1
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 2.3e-36 155.6 111 68.5
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 4.0e-36 154.8 113 66.4
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 4.0e-36 154.8 113 67.3
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 6.8e-36 154.1 111 66.7
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 8.9e-36 153.7 113 65.5
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.2e-35 153.3 113 65.5
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 1.5e-35 152.9 112 64.3
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 4.4e-35 151.4 113 67.3
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 7.5e-35 150.6 114 66.7
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 7.5e-35 150.6 113 67.3
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 7.5e-35 150.6 110 68.2
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 9.8e-35 150.2 112 66.1
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.3e-34 149.8 116 65.5
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.7e-34 149.4 110 67.3
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.7e-34 149.4 110 67.3
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 4.9e-34 147.9 116 65.5
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 4.9e-34 147.9 114 62.3
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 8.3e-34 147.1 110 67.3
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 8.3e-34 147.1 110 67.3
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.1e-33 146.7 116 64.7
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.1e-33 146.7 113 63.7
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 1.4e-33 146.4 114 64.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.8e-33 146.0 114 60.5
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 2.4e-33 145.6 112 67.0
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 3.1e-33 145.2 114 64.0
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 4.1e-33 144.8 115 64.3
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 4.1e-33 144.8 111 64.9
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 4.1e-33 144.8 112 63.4
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 4.1e-33 144.8 110 66.4
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 4.1e-33 144.8 114 64.9
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 5.4e-33 144.4 112 67.0
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 5.4e-33 144.4 112 64.3
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 7.0e-33 144.1 114 63.2
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 7.0e-33 144.1 114 62.3
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.6e-32 142.9 120 63.3
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.0e-32 142.5 111 67.6
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.5e-32 141.4 116 61.2
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.5e-32 141.4 112 66.1
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.0e-31 140.2 113 63.7
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 2.9e-31 138.7 113 63.7
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 8.6e-31 137.1 111 62.2
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-30 136.7 116 59.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 1.5e-30 136.3 110 61.8
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.2e-29 133.3 114 59.6
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 2.8e-29 132.1 112 54.5
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 3.6e-29 131.7 111 57.7
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 4.7e-29 131.3 152 49.3
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 4.7e-29 131.3 112 57.1
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 8.0e-29 130.6 117 59.0
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.8e-28 129.4 112 55.4
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 3.0e-28 128.6 117 55.6
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 4.0e-28 128.3 113 57.5
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.5e-27 126.3 114 52.6
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 4.4e-27 124.8 110 55.5
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 9.8e-27 123.6 110 53.6
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 9.8e-27 123.6 110 56.4
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.3e-26 123.2 113 58.4
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 1.3e-26 123.2 112 58.9
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 2.2e-26 122.5 113 58.4
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 2.2e-26 122.5 110 55.5
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 4.9e-26 121.3 107 55.1
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 4.9e-26 121.3 110 52.7
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 1.1e-25 120.2 110 54.5
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.1e-25 120.2 110 54.5
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.1e-25 120.2 110 54.5
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 1.1e-25 120.2 110 54.5
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.4e-25 119.8 110 52.7
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 7.0e-25 117.5 94 66.0
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 9.2e-25 117.1 111 52.3
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.6e-24 116.3 88 63.6
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 3.5e-24 115.2 82 67.1
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 7.8e-24 114.0 110 51.8
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.7e-23 112.8 114 52.6
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 3.9e-23 111.7 84 65.5
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 3.9e-23 111.7 141 46.8
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 5.0e-23 111.3 110 52.7
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 1.5e-22 109.8 86 60.5
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 4.3e-22 108.2 108 49.1
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 9.5e-22 107.1 89 58.4
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.6e-21 105.1 85 61.2
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 3.6e-21 105.1 83 62.7
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 1.4e-20 103.2 113 51.3
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.4e-20 103.2 85 60.0
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.4e-20 103.2 85 60.0
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.5e-19 99.8 114 46.5
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 9.8e-19 97.1 78 61.5
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.7e-18 96.3 83 54.2
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.4e-17 93.2 83 56.6
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 2.4e-17 92.4 110 50.9
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 1.6e-16 89.7 194 34.0
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 2.1e-16 89.4 99 50.5
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 8.1e-13 77.4 77 49.4
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 4.1e-09 65.1 81 45.7


User provided reference genes

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