Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g065630.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 8.1e-28 126.3 63 100.0
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.6e-15 85.5 54 79.6
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.6e-15 85.5 54 79.6
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 2.7e-15 84.7 54 75.9
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.7e-15 84.7 54 77.8
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 3.6e-15 84.3 54 77.8
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 6.1e-15 83.6 54 77.8
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.3e-14 82.4 54 75.9
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 1.3e-14 82.4 54 75.9
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 1.8e-14 82.0 52 76.9
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 3.0e-14 81.3 53 77.4
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 6.7e-14 80.1 52 73.1
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 6.7e-14 80.1 52 73.1
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 1.5e-13 79.0 59 67.8
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 3.3e-13 77.8 54 70.4
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.3e-13 77.4 54 68.5
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 4.3e-13 77.4 54 68.5
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 4.3e-13 77.4 49 77.6
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 5.7e-13 77.0 54 70.4
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.7e-13 76.3 52 69.2
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 9.7e-13 76.3 54 64.8
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.3e-12 75.9 56 62.5
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 1.3e-12 75.9 52 71.2
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 2.2e-12 75.1 54 66.7
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 2.2e-12 75.1 54 66.7
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 2.8e-12 74.7 54 68.5
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.8e-12 74.7 54 66.7
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 2.8e-12 74.7 52 69.2
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 2.8e-12 74.7 54 68.5
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.7e-12 74.3 54 66.7
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 4.8e-12 73.9 54 64.8
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 4.8e-12 73.9 54 64.8
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 4.8e-12 73.9 50 72.0
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-11 72.4 54 66.7
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.4e-11 72.4 54 64.8
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.4e-11 72.4 54 64.8
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.4e-11 72.4 54 64.8
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 1.8e-11 72.0 54 63.0
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 2.4e-11 71.6 52 65.4
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 2.4e-11 71.6 52 67.3
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 9.1e-11 69.7 54 63.0
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 1.5e-10 68.9 49 71.4
Hund03917 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-10 68.9 56 60.7
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-10 68.6 54 59.3
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.4e-10 67.8 54 66.7
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 1.0e-09 66.2 47 68.1
Medtr5g094180 Medicago truncatula HOM05D001200 ORTHO05D002731 1.7e-09 65.5 50 62.0
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.7e-09 65.5 54 64.8
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 2.2e-09 65.1 54 57.4
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 2.9e-09 64.7 52 61.5
Medtr5g032430 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-09 64.3 50 60.0
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 6.5e-09 63.5 54 57.4
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 6.5e-09 63.5 49 63.3
Medtr5g021300 Medicago truncatula HOM05D001200 ORTHO05D002731 8.5e-09 63.2 54 55.6
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-08 62.8 54 53.7
Medtr8g086440 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-08 62.8 54 53.7
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-08 62.4 54 55.6
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 1.9e-08 62.0 43 74.4
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 3.2e-08 61.2 52 55.8
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 4.2e-08 60.8 49 59.2
Medtr1g103000 Medicago truncatula HOM05D001200 ORTHO05D002731 9.4e-08 59.7 55 54.5
Medtr4g106580 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-07 59.3 50 56.0
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-07 59.3 55 52.7
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-07 58.9 54 51.9
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 2.7e-07 58.2 47 57.4
Medtr7g044990 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-07 57.8 47 57.4
CSS0005564 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 4.6e-07 57.4 48 60.4
CSS0038532 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 4.6e-07 57.4 48 62.5
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-07 57.4 50 54.0
Medtr7g112630 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-07 57.4 54 51.9
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 7.9e-07 56.6 47 57.4
Medtr0148s0110 Medicago truncatula HOM05D001200 ORTHO05D002731 2.3e-06 55.1 48 56.2
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 3.9e-06 54.3 32 75.0
Mapoly0092s0003 Marchantia polymorpha HOM05D001200 ORTHO05D002731 5.1e-06 53.9 50 54.0
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 6.7e-06 53.5 43 58.1


User provided reference genes

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