Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 5.9e-59 230.7 122 100.0
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.2e-43 179.9 120 80.8
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.2e-43 179.9 120 80.8
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 2.5e-41 172.2 120 77.5
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 2.5e-41 172.2 120 77.5
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 2.0e-38 162.5 120 73.3
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.6e-38 162.2 120 73.3
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 4.9e-37 157.9 120 70.8
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 6.4e-37 157.5 120 70.8
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 6.4e-37 157.5 120 70.8
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 2.4e-36 155.6 120 69.2
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-36 154.5 120 67.5
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.1e-35 152.5 120 68.3
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 2.1e-35 152.5 120 68.3
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 2.7e-35 152.1 120 70.0
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-34 149.8 120 66.7
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 5.1e-34 147.9 120 66.7
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 5.1e-34 147.9 119 67.2
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 1.9e-33 146.0 120 67.5
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 2.5e-33 145.6 119 66.4
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.3e-33 145.2 120 65.0
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.3e-33 145.2 120 65.0
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.3e-33 145.2 120 64.2
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 3.3e-33 145.2 120 65.0
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 4.3e-33 144.8 119 65.5
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-32 142.9 119 63.0
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-32 142.9 119 63.0
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 1.4e-31 139.8 120 65.0
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 1.8e-31 139.4 119 61.3
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 6.8e-31 137.5 122 63.9
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.7e-29 132.9 112 64.3
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.2e-29 132.5 109 68.8
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 5.4e-28 127.9 122 62.3
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 7.3e-25 117.5 119 54.6
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 6.9e-23 110.9 108 57.4
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 1.2e-22 110.2 88 67.0
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 3.4e-22 108.6 120 54.2
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 5.8e-22 107.8 119 52.1
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 5.4e-20 101.3 71 71.8
HanXRQChr08g0211981 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-19 100.1 79 67.1
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 1.6e-19 99.8 120 50.0
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 1.1e-17 93.6 70 68.6
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 1.5e-17 93.2 71 66.2
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 1.3e-16 90.1 119 47.9
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 8.1e-16 87.4 68 66.2
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 8.1e-16 87.4 73 65.8
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 5.3e-15 84.7 71 60.6
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 5.3e-15 84.7 78 60.3
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 2.6e-14 82.4 103 47.6
BolSC45t60911H Brassica oleracea HOM05D001200 ORTHO05D010401 4.5e-14 81.6 60 73.3
HanXRQChr01g0020071 Helianthus annuus HOM05D001200 ORTHO05D002731 9.9e-14 80.5 62 69.4
BraSC25t45908Z Brassica rapa HOM05D001200 ORTHO05D010401 2.2e-13 79.3 60 71.7
Lalb_Chr16g0388551 Lupinus albus HOM05D001200 ORTHO05D002731 3.8e-13 78.6 76 56.6
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 3.2e-12 75.5 76 57.9
Oeu012819.1 Olea europaea HOM05D001200 ORTHO05D002731 1.2e-11 73.6 86 50.0
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.7e-11 72.4 72 61.1
CAN.G386.25 Capsicum annuum HOM05D001200 ORTHO05D010401 4.6e-11 71.6 48 75.0
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-10 69.3 58 63.8
HanXRQChr00c0894g0577811 Helianthus annuus HOM05D001200 ORTHO05D002731 6.7e-10 67.8 91 51.6
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 8.7e-10 67.4 57 68.4
Potri.008G202133 Populus trichocarpa HOM05D001200 ORTHO05D002731 5.6e-09 64.7 86 44.2
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 9.6e-09 63.9 54 63.0
Hund08792 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund12715 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund12842 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund23967 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund27632 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund27679 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund27756 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund27832 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28331 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28439 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28447 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28537 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28586 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28595 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28849 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28945 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28950 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28955 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28960 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund28973 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29027 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29090 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29108 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29180 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29185 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29243 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29248 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29250 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29255 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29262 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29272 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29276 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29280 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29284 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29289 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29317 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29435 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29437 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29452 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29498 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29714 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29756 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29813 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund29817 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund30037 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund30038 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund30121 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
Hund30178 Selenicereus undatus HOM05D001200 ORTHO05D010401 9.6e-09 63.9 60 61.7
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 1.3e-08 63.5 52 65.4
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 4.8e-08 61.6 45 71.1
HanXRQChr17g0557771 Helianthus annuus HOM05D001200 ORTHO05D002731 4.8e-08 61.6 49 67.3
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 4.8e-08 61.6 54 61.1
Hund28980 Selenicereus undatus HOM05D001200 ORTHO05D010401 4.8e-08 61.6 60 60.0
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.4e-07 60.1 49 65.3
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 1.4e-07 60.1 46 65.2
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 1.8e-07 59.7 117 36.8
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 2.4e-07 59.3 54 59.3
C06p42260 Brassica napus HOM05D001200 ORTHO05D010401 3.1e-07 58.9 44 70.5
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 3.1e-07 58.9 54 57.4
Medtr7g044990 Medicago truncatula HOM05D001200 ORTHO05D002731 4.0e-07 58.5 53 56.6
Medtr3g109440 Medicago truncatula HOM05D001200 ORTHO05D002731 5.3e-07 58.2 54 55.6
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-06 57.0 54 59.3
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 1.2e-06 57.0 79 46.8
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 3.4e-06 55.5 54 57.4


User provided reference genes

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