Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.5e-50 202.6 109 100.0
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 8.8e-38 160.2 108 83.3
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 8.8e-38 160.2 108 83.3
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 7.5e-37 157.1 108 81.5
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 3.1e-35 151.8 108 75.9
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 3.1e-35 151.8 108 75.9
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.6e-34 149.4 108 75.9
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.7e-34 148.7 108 75.9
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-33 145.6 108 72.2
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-33 145.6 108 72.2
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-33 145.6 108 72.2
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-33 145.6 108 72.2
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-33 145.6 108 72.2
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-33 145.6 108 72.2
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 3.8e-33 144.8 108 74.1
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 5.0e-33 144.4 108 74.1
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 8.5e-33 143.7 108 74.1
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 8.5e-33 143.7 106 74.5
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.5e-32 142.9 108 73.1
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 3.2e-32 141.7 108 73.1
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.2e-32 141.7 108 75.9
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 5.5e-32 141.0 108 69.4
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 5.5e-32 141.0 108 70.4
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 5.5e-32 141.0 108 70.4
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 5.5e-32 141.0 108 70.4
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 5.5e-32 141.0 108 71.3
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 7.2e-32 140.6 108 71.3
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 7.2e-32 140.6 108 71.3
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 7.2e-32 140.6 108 70.4
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 2.1e-31 139.0 103 73.8
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 8.0e-31 137.1 101 72.3
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 8.0e-31 137.1 101 72.3
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 2.3e-30 135.6 108 74.1
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 3.0e-30 135.2 96 74.0
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 6.8e-30 134.0 100 71.0
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 6.8e-30 134.0 151 57.6
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 8.8e-30 133.7 108 66.7
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 3.4e-29 131.7 108 65.7
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.7e-28 129.4 109 67.9
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.8e-28 128.6 108 64.8
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.8e-28 128.6 108 64.8
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 4.8e-28 127.9 108 67.6
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 1.4e-27 126.3 85 76.5
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 1.8e-27 125.9 106 64.2
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.4e-27 125.6 103 66.0
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 9.1e-27 123.6 90 74.4
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.0e-26 122.5 102 64.7
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 2.7e-26 122.1 105 63.8
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 3.5e-26 121.7 89 75.3
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 2.9e-25 118.6 102 64.7
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.6e-25 117.1 89 69.7
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-24 116.7 78 76.9
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-24 116.3 78 75.6
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 2.5e-24 115.5 80 77.5
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 2.5e-24 115.5 108 60.2
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.3e-24 115.2 78 75.6
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-23 112.5 101 61.4
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 1.8e-22 109.4 85 67.1
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 2.3e-22 109.0 83 68.7
Medtr5g021300 Medicago truncatula HOM05D001200 ORTHO05D002731 4.0e-22 108.2 93 63.4
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 5.2e-22 107.8 80 71.2
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 1.5e-21 106.3 90 63.3
Medtr5g094180 Medicago truncatula HOM05D001200 ORTHO05D002731 7.5e-21 104.0 90 63.3
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 1.3e-20 103.2 71 78.9
Medtr7g112630 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-20 103.2 89 65.2
Medtr5g032430 Medicago truncatula HOM05D001200 ORTHO05D002731 1.7e-20 102.8 84 65.5
Medtr8g086440 Medicago truncatula HOM05D001200 ORTHO05D002731 6.3e-20 100.9 90 58.9
Medtr4g086110 Medicago truncatula HOM05D001200 ORTHO05D002731 3.1e-19 98.6 89 61.8
Hund03917 Selenicereus undatus HOM05D001200 ORTHO05D002731 7.0e-19 97.4 85 64.7
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 7.0e-19 97.4 78 67.9
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 4.5e-18 94.7 89 57.3
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 1.3e-17 93.2 64 76.6
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-17 91.7 82 62.2
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 3.8e-17 91.7 60 75.0
Lalb_Chr18g0049441 Lupinus albus HOM05D001200 ORTHO05D002731 2.5e-16 89.0 88 60.2
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 5.6e-16 87.8 105 49.5
Medtr2g047260 Medicago truncatula HOM05D001200 ORTHO05D002731 5.6e-16 87.8 105 52.4
Medtr0148s0110 Medicago truncatula HOM05D001200 ORTHO05D002731 2.8e-15 85.5 134 43.3
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.6e-15 85.1 80 61.2
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 3.6e-15 85.1 105 52.4
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 8.0e-15 84.0 50 82.0
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 8.0e-15 84.0 74 59.5
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 4.0e-14 81.6 90 53.3
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 6.8e-14 80.9 79 57.0
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-13 80.1 65 64.6
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 3.4e-13 78.6 74 59.5
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 4.4e-13 78.2 63 66.7
Medtr5g099080 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-12 76.6 72 59.7
Ciclev10006660m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.7e-12 76.3 59 62.7
Medtr3g109440 Medicago truncatula HOM05D001200 ORTHO05D002731 1.7e-12 76.3 61 65.6
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 2.2e-12 75.9 65 60.0
Medtr7g044990 Medicago truncatula HOM05D001200 ORTHO05D002731 2.9e-12 75.5 77 53.2
Medtr1g040655 Medicago truncatula HOM05D001200 ORTHO05D002731 4.9e-12 74.7 63 66.7
Medtr3g008330 Medicago truncatula HOM05D001200 ORTHO05D002731 2.4e-11 72.4 55 67.3
Gohir.D13G018850 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.2e-11 72.0 67 61.2
Medtr2g102090 Medicago truncatula HOM05D001200 ORTHO05D002731 4.1e-11 71.6 105 44.8
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 1.6e-10 69.7 57 68.4
Medtr3g114440 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-10 69.3 90 48.9
Gorai.013G020900 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.5e-10 68.6 67 58.2
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 3.5e-10 68.6 86 47.7
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 4.6e-10 68.2 48 72.9
Solyc01g065630.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.3e-09 65.9 54 66.7
BolSC29t60621H Brassica oleracea HOM05D001200 ORTHO05D002731 3.0e-09 65.5 45 75.6
Medtr4g106580 Medicago truncatula HOM05D001200 ORTHO05D002731 5.0e-09 64.7 53 62.3
Medtr8g085370 Medicago truncatula HOM05D001200 ORTHO05D002731 6.6e-09 64.3 90 45.6
HanXRQChr01g0020071 Helianthus annuus HOM05D001200 ORTHO05D002731 1.5e-08 63.2 50 68.0
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 3.3e-08 62.0 44 70.5
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 3.3e-08 62.0 51 62.7
HanXRQChr17g0557771 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-08 61.2 45 68.9
CSS0005564 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 9.5e-08 60.5 44 68.2
Medtr1g103000 Medicago truncatula HOM05D001200 ORTHO05D002731 9.5e-08 60.5 52 59.6
CSS0038532 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 3.6e-07 58.5 44 68.2
Mapoly0092s0003 Marchantia polymorpha HOM05D001200 ORTHO05D002731 4.7e-07 58.2 87 44.8
Lalb_Chr16g0388551 Lupinus albus HOM05D001200 ORTHO05D002731 8.0e-07 57.4 54 55.6
HanXRQChr00c0289g0573121 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-06 56.2 44 68.2
Medtr3g082380 Medicago truncatula HOM05D001200 ORTHO05D002731 6.8e-06 54.3 83 45.8


User provided reference genes

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