Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g060390.1 Solanum lycopersicum HOM05D000397 ORTHO05D038124 1.5e-49 199.5 127 100.0
PGSC0003DMG400006168 Solanum tuberosum HOM05D000397 ORTHO05D000492 1.1e-39 166.8 91 92.3
Sopen01g053720 Solanum pennellii HOM05D000397 ORTHO05D000492 7.9e-38 160.6 85 92.9
CAN.G588.88 Capsicum annuum HOM05D000397 ORTHO05D000492 9.3e-31 137.1 85 81.2
Nitab4.5_0000283g0470 Nicotiana tabacum HOM05D000397 ORTHO05D000492 1.9e-28 129.4 84 77.4
Nitab4.5_0003914g0110 Nicotiana tabacum HOM05D000397 ORTHO05D000492 9.6e-28 127.1 84 76.2
Peaxi162Scf00362g00057 Petunia axillaris HOM05D000397 ORTHO05D000492 6.0e-22 107.8 74 67.6
Sopen01g026540 Solanum pennellii HOM05D000006 ORTHO05D000001 4.3e-20 101.7 127 70.1
Oeu028975.1 Olea europaea HOM05D000397 ORTHO05D000492 1.6e-19 99.8 91 58.2
Cc09_g09840 Coffea canephora HOM05D000397 ORTHO05D000492 4.5e-17 91.7 88 54.5
CSS0022920 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D000492 3.8e-16 88.6 91 52.7
MSTRG.19984 Avicennia marina HOM05D000397 ORTHO05D000492 1.9e-15 86.3 91 58.2
Lj5C178T2 Lonicera japonica HOM05D000397 ORTHO05D000492 2.5e-15 85.9 84 54.8
Migut.N01328 Erythranthe guttata HOM05D000397 ORTHO05D000492 5.5e-15 84.7 61 68.9
Dinv14118 Davidia involucrata HOM05D000397 ORTHO05D000492 2.1e-14 82.8 91 48.4
Oeu019919.1 Olea europaea HOM05D000397 ORTHO05D000492 1.0e-13 80.5 84 57.1
vmacro17315 Vaccinium macrocarpon HOM05D000397 ORTHO05D000492 5.1e-13 78.2 91 50.5
Actinidia32037 Actinidia chinensis HOM05D000397 ORTHO05D038124 1.5e-12 76.6 87 48.3
Haze_02124 Corylus avellana HOM05D000397 ORTHO05D000492 3.3e-12 75.5 91 46.2
Cfa005259 Carpinus fangiana HOM05D000397 ORTHO05D000492 9.7e-12 73.9 90 46.7
MSTRG.5459 Avicennia marina HOM05D000397 ORTHO05D000492 2.8e-11 72.4 79 48.1
Rhsim05G0054000 Rhododendron simsii HOM05D000397 ORTHO05D000492 5.3e-10 68.2 84 45.2
CiPaw.05G083400 Carya illinoinensis HOM05D000397 ORTHO05D000492 1.5e-09 66.6 80 48.8
Glyma.20G107300 Glycine max HOM05D000397 ORTHO05D000492 2.0e-09 66.2 92 45.7
SalBow5G4036 Salvia bowleyana HOM05D000397 ORTHO05D000492 2.6e-09 65.9 86 47.7
SGA_v2.0_scaffold80G25839 Striga asiatica HOM05D000397 ORTHO05D000492 4.5e-09 65.1 46 67.4
GSVIVG01024005001 Vitis vinifera HOM05D000397 ORTHO05D000492 4.5e-09 65.1 95 41.1
MD05G1123200 Malus domestica HOM05D000397 ORTHO05D000492 1.0e-08 63.9 95 43.2
Potri.009G136000 Populus trichocarpa HOM05D000397 ORTHO05D000492 5.0e-08 61.6 95 41.1
SGA_v2.0_scaffold207G41933 Striga asiatica HOM05D000397 ORTHO05D000492 5.0e-08 61.6 64 50.0
Duzib248G1313 Durio zibethinus HOM05D000397 ORTHO05D000492 8.5e-08 60.8 84 40.5
MBI08_g05235_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D000492 8.5e-08 60.8 93 43.0
MD10G1126200 Malus domestica HOM05D000397 ORTHO05D000492 8.5e-08 60.8 84 44.0
Thecc.02G057900 Theobroma cacao HOM05D000397 ORTHO05D000492 1.1e-07 60.5 96 43.8
Prupe.8G167100 Prunus persica HOM05D000397 ORTHO05D000492 1.4e-07 60.1 88 42.0
Glyma.10G282000 Glycine max HOM05D000397 ORTHO05D000492 1.9e-07 59.7 89 44.9
Phvul.007G018800 Phaseolus vulgaris HOM05D000397 ORTHO05D000492 1.9e-07 59.7 84 45.2
TAR625G1512 Trochodendron aralioides HOM05D000397 ORTHO05D000492 1.9e-07 59.7 92 43.5
Atru.chr5.3379 Acer truncatum HOM05D000397 ORTHO05D000492 2.5e-07 59.3 79 43.0
TAR381G0150 Trochodendron aralioides HOM05D000397 ORTHO05D001943 3.2e-07 58.9 93 45.2
QL11p050996 Quercus lobata HOM05D000397 ORTHO05D000492 7.2e-07 57.8 76 44.7
Sc18g0006390 Simmondsia chinensis HOM05D000397 ORTHO05D000492 1.6e-06 56.6 91 35.2
CiPaw.06G121000 Carya illinoinensis HOM05D000397 ORTHO05D000492 2.1e-06 56.2 89 38.2
FAN15G0320 Fragaria x ananassa HOM05D000397 ORTHO05D000492 2.7e-06 55.8 88 42.0
Potri.004G176000 Populus trichocarpa HOM05D000397 ORTHO05D000492 2.7e-06 55.8 93 37.6
VMungo0720G0354 Vigna mungo HOM05D000397 ORTHO05D000492 2.7e-06 55.8 84 45.2
CANSAT25G0573 Cannabis sativa HOM05D000397 ORTHO05D000492 3.6e-06 55.5 76 44.7
TWI31G0794 Tripterygium wilfordii HOM05D000397 ORTHO05D000492 3.6e-06 55.5 90 43.3
RcHm_v2.0_Chr6g0278491 Rosa chinensis HOM05D000397 ORTHO05D000492 6.1e-06 54.7 83 43.4
Lalb_Chr02g0143451 Lupinus albus HOM05D000397 ORTHO05D000492 7.9e-06 54.3 95 37.9


User provided reference genes

Program Settings