Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g057430.3 Solanum lycopersicum HOM05D002923 ORTHO05D392087 9.7e-24 112.5 50 100.0
Peaxi162Scf00056g00313 Petunia axillaris HOM05D002923 ORTHO05D003484 2.8e-07 57.8 30 83.3
Solyc01g094340.3 Solanum lycopersicum HOM05D002923 ORTHO05D003484 2.8e-07 57.8 30 83.3
Sopen01g038130 Solanum pennellii HOM05D002923 ORTHO05D003484 2.8e-07 57.8 30 83.3
Nitab4.5_0009210g0030 Nicotiana tabacum HOM05D002923 ORTHO05D003484 3.7e-07 57.4 30 80.0
Ca_26813_v3 Cicer arietinum L. HOM05D002923 ORTHO05D003484 4.8e-07 57.0 34 67.6
Migut.O00953 Erythranthe guttata HOM05D002923 ORTHO05D003484 4.8e-07 57.0 30 80.0
Oeu014666.1 Olea europaea HOM05D002923 ORTHO05D003484 4.8e-07 57.0 30 80.0
PGSC0003DMG400000025 Solanum tuberosum HOM05D002923 ORTHO05D003484 4.8e-07 57.0 30 80.0
EL10Ac1g00534 Beta vulgaris HOM05D002923 ORTHO05D003484 6.3e-07 56.6 30 80.0
AUR62004321 Chenopodium quinoa HOM05D002923 ORTHO05D003484 6.3e-07 56.6 30 80.0
Nitab4.5_0002160g0030 Nicotiana tabacum HOM05D002923 ORTHO05D003484 6.3e-07 56.6 30 76.7
ATR0680G246 Amborella trichopoda HOM05D002923 ORTHO05D003484 1.1e-06 55.8 30 76.7
Medtr7g066870 Medicago truncatula HOM05D002923 ORTHO05D003484 1.1e-06 55.8 35 62.9
SalBow3G0582 Salvia bowleyana HOM05D002923 ORTHO05D003484 1.1e-06 55.8 30 76.7
TPR.G1591 Trifolium pratense HOM05D002923 ORTHO05D003484 1.1e-06 55.8 34 64.7
Cc02_g37720 Coffea canephora HOM05D002923 ORTHO05D003484 1.4e-06 55.5 30 76.7
Lalb_Chr01g0022891 Lupinus albus HOM05D002923 ORTHO05D003484 1.8e-06 55.1 34 64.7
Actinidia13785 Actinidia chinensis HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 67.6
Actinidia29136 Actinidia chinensis HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 67.6
ATR0618G266 Amborella trichopoda HOM05D002923 ORTHO05D003484 2.4e-06 54.7 30 73.3
EL10Ac7g17118 Beta vulgaris HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
CDE03G0020 Ceratophyllum demersum HOM05D002923 ORTHO05D003484 2.4e-06 54.7 30 73.3
CDE04G0231 Ceratophyllum demersum HOM05D002923 ORTHO05D003484 2.4e-06 54.7 30 73.3
AUR62037670 Chenopodium quinoa HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
AUR62041363 Chenopodium quinoa HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
Dinv35516 Davidia involucrata HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
Glyma.18G195700 Glycine max HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
Glyma.18G195900 Glycine max HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
Glyma.18G196000 Glycine max HOM05D002923 ORTHO05D003484 2.4e-06 54.7 34 64.7
Hma1.2p1_0033F.1_g020360 Hydrangea macrophylla HOM05D002923 ORTHO05D003484 2.4e-06 54.7 30 73.3
TAR369G0530 Trochodendron aralioides HOM05D002923 ORTHO05D003484 2.4e-06 54.7 30 73.3
TAR623G0856 Trochodendron aralioides HOM05D002923 ORTHO05D003484 2.4e-06 54.7 30 73.3
MSTRG.26796 Avicennia marina HOM05D002923 ORTHO05D003484 3.1e-06 54.3 34 64.7
AUR62033323 Chenopodium quinoa HOM05D002923 ORTHO05D003484 3.1e-06 54.3 30 76.7
AUR62033336 Chenopodium quinoa HOM05D002923 ORTHO05D003484 3.1e-06 54.3 30 76.7
TAR629G1449 Trochodendron aralioides HOM05D002923 ORTHO05D003484 3.1e-06 54.3 30 73.3
Dinv32457 Davidia involucrata HOM05D002923 ORTHO05D003484 4.1e-06 53.9 30 70.0
Dinv37086 Davidia involucrata HOM05D002923 ORTHO05D003484 4.1e-06 53.9 34 64.7
Duzib128G0471 Durio zibethinus HOM05D002923 ORTHO05D003484 4.1e-06 53.9 35 62.9
CSS0015910 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
CSS0019607 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
Cpa.g.sc18.229 Carica papaya HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
COL.COLO4_12679 Corchorus olitorius HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
Duzib093G0767 Durio zibethinus HOM05D002923 ORTHO05D003484 5.3e-06 53.5 35 60.0
Duzib138G0954 Durio zibethinus HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
Lsat_1_v5_gn_9_35780 Lactuca sativa HOM05D002923 ORTHO05D003484 5.3e-06 53.5 34 64.7
Lj1g0012741 Lotus japonicus HOM05D002923 ORTHO05D003484 5.3e-06 53.5 34 64.7
Lj1g0018566 Lotus japonicus HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
MBI17_g35771_MAGBIO Magnolia biondii HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
PSO478G2799 Papaver somniferum HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
PSO782G3437 Papaver somniferum HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
Psat0s1978g0280 Pisum sativum HOM05D002923 ORTHO05D003484 5.3e-06 53.5 34 58.8
Potri.014G081000 Populus trichocarpa HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
Sabra06G0073700 Salix brachista HOM05D002923 ORTHO05D003484 5.3e-06 53.5 34 64.7
Sabra14G0058900 Salix brachista HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
Sabra16G0107100 Salix brachista HOM05D002923 ORTHO05D003484 5.3e-06 53.5 34 64.7
PGSC0003DMG400020325 Solanum tuberosum HOM05D002923 ORTHO05D003484 5.3e-06 53.5 34 64.7
Thecc.01G363000 Theobroma cacao HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
TAR374G0869 Trochodendron aralioides HOM05D002923 ORTHO05D003484 5.3e-06 53.5 30 70.0
MSTRG.19035 Avicennia marina HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
Cfa017260 Carpinus fangiana HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
ClCG04G007280 Citrullus lanatus HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
Ciclev10011119m.g Citrus clementina HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
Haze_20942 Corylus avellana HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
Oeu028727.1 Olea europaea HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
Oeu040801.1 Olea europaea HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
SalBow1G6626 Salvia bowleyana HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
SalBow5G3414 Salvia bowleyana HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
SalBow5G5371 Salvia bowleyana HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 61.8
PGSC0003DMG400011755 Solanum tuberosum HOM05D002923 ORTHO05D028603 7.0e-06 53.1 29 82.8
VMungo1383G3014 Vigna mungo HOM05D002923 ORTHO05D003484 7.0e-06 53.1 34 64.7
GSVIVG01026852001 Vitis vinifera HOM05D002923 ORTHO05D003484 7.0e-06 53.1 30 70.0
Atru.chr5.481 Acer truncatum HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 70.0
Ah.12g060020 Amaranthus hybridus HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
Aqoxy1G00729 Aquilegia oxysepala HOM05D002923 ORTHO05D003484 9.1e-06 52.8 35 62.9
CSS0010473 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
CSS0024926 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
CAN.G284.8 Capsicum annuum HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
ClCG05G001660 Citrullus lanatus HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 73.3
COL.COLO4_14614 Corchorus olitorius HOM05D002923 ORTHO05D003484 9.1e-06 52.8 35 60.0
MELO3C006123.2 Cucumis melo HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 73.3
Migut.L01991 Erythranthe guttata HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
FvH4_7g13820 Fragaria vesca HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
FAN01G2587 Fragaria x ananassa HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
FAN03G1194 Fragaria x ananassa HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
FAN06G1203 Fragaria x ananassa HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
FAN06G5053 Fragaria x ananassa HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
FAN10G1917 Fragaria x ananassa HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
Hma1.2p1_0244F.1_g101180 Hydrangea macrophylla HOM05D002923 ORTHO05D003484 9.1e-06 52.8 35 60.0
Nn2g13595 Nelumbo nucifera HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 70.0
Nitab4.5_0000008g0600 Nicotiana tabacum HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
Nitab4.5_0006254g0020 Nicotiana tabacum HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
Peaxi162Scf00141g00125 Petunia axillaris HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
RcHm_v2.0_Chr1g0354001 Rosa chinensis HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 66.7
Sed0012599 Sechium edule HOM05D002923 ORTHO05D003484 9.1e-06 52.8 30 73.3
Solyc09g013080.3 Solanum lycopersicum HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
Sopen09g006920 Solanum pennellii HOM05D002923 ORTHO05D003484 9.1e-06 52.8 34 61.8
Thecc.05G023000 Theobroma cacao HOM05D002923 ORTHO05D003484 9.1e-06 52.8 35 60.0


User provided reference genes

Program Settings