Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g056960.1 Solanum lycopersicum HOM05D005268 ORTHO05D007166 4.0e-122 441.4 218 100.0
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-46 190.7 137 75.2
Sopen01g027240 Solanum pennellii HOM05D005268 ORTHO05D000493 4.5e-41 172.2 300 40.0
Solyc01g065840.4 Solanum lycopersicum HOM05D005268 ORTHO05D000493 3.8e-40 169.1 300 39.7
Solyc01g065740.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 3.8e-32 142.5 293 36.2
Nitab4.5_0001915g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.6e-30 137.1 307 35.8
Peaxi162Scf00168g01712 Petunia axillaris HOM05D005268 ORTHO05D000493 2.6e-28 129.8 338 32.2
Peaxi162Scf00168g00921 Petunia axillaris HOM05D005268 ORTHO05D000493 4.1e-26 122.5 296 33.1
Peaxi162Scf00756g00433 Petunia axillaris HOM05D005268 ORTHO05D000493 3.8e-24 115.9 300 32.3
Nitab4.5_0001915g0080 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.5e-23 113.2 214 36.9
Sopen01g027170 Solanum pennellii HOM05D005268 ORTHO05D000493 5.5e-23 112.1 148 48.0
Peaxi162Scf00066g01416 Petunia axillaris HOM05D005268 ORTHO05D000493 1.2e-22 110.9 235 34.9
Peaxi162Scf00168g01738 Petunia axillaris HOM05D005268 ORTHO05D000493 1.2e-22 110.9 245 34.3
Nitab4.5_0001915g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.4e-21 107.5 177 39.5
Nitab4.5_0001915g0090 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.4e-21 107.5 327 30.0
Peaxi162Scf00168g01740 Petunia axillaris HOM05D005268 ORTHO05D000493 1.8e-21 107.1 268 33.2
Nitab4.5_0002580g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.8e-19 99.0 259 30.1
Peaxi162Scf00066g01521 Petunia axillaris HOM05D005268 ORTHO05D000493 6.3e-19 98.6 302 27.8
Peaxi162Scf00168g00719 Petunia axillaris HOM05D005268 ORTHO05D000493 6.3e-19 98.6 245 31.4
Nitab4.5_0000830g0090 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.4e-18 97.4 231 32.0
Nitab4.5_0004040g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.8e-18 97.1 265 29.8
Peaxi162Scf00168g01739 Petunia axillaris HOM05D005268 ORTHO05D000493 1.8e-18 97.1 299 31.4
Peaxi162Scf00066g01320 Petunia axillaris HOM05D005268 ORTHO05D000493 2.4e-18 96.7 244 30.3
Nitab4.5_0007952g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.1e-18 95.9 293 29.4
CAN.G726.13 Capsicum annuum HOM05D005268 ORTHO05D000493 9.1e-18 94.7 265 30.6
Peaxi162Scf00168g00922 Petunia axillaris HOM05D005268 ORTHO05D000493 2.0e-17 93.6 200 37.5
Peaxi162Scf00338g00523 Petunia axillaris HOM05D005268 ORTHO05D011324 1.0e-16 91.3 244 31.6
PGSC0003DMG400023006 Solanum tuberosum HOM05D005268 ORTHO05D000493 2.2e-16 90.1 182 39.6
Solyc04g072360.2 Solanum lycopersicum HOM05D005268 ORTHO05D000493 3.8e-16 89.4 289 26.3
Nitab4.5_0003030g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.1e-15 87.8 296 27.0
Nitab4.5_0003375g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.5e-15 86.7 291 28.9
Peaxi162Scf00066g00161 Petunia axillaris HOM05D005268 ORTHO05D000493 2.5e-15 86.7 303 27.7
PGSC0003DMG400023008 Solanum tuberosum HOM05D005268 ORTHO05D000493 9.4e-15 84.7 180 38.3
Sopen04g028530 Solanum pennellii HOM05D000002 ORTHO05D000047 8.0e-14 81.6 187 31.6
Sopen04g028510 Solanum pennellii HOM05D005268 ORTHO05D000493 1.4e-13 80.9 249 27.3
Peaxi162Scf00360g00618 Petunia axillaris HOM05D005268 ORTHO05D000493 1.8e-13 80.5 266 28.6
Nitab4.5_0002580g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.3e-13 80.1 369 24.4
Peaxi162Scf00066g01220 Petunia axillaris HOM05D005268 ORTHO05D000493 2.3e-13 80.1 238 29.4
Peaxi162Scf00756g00431 Petunia axillaris HOM05D005268 ORTHO05D000493 2.3e-13 80.1 312 26.3
Peaxi162Scf00168g00113 Petunia axillaris HOM05D005268 ORTHO05D000493 3.0e-13 79.7 249 29.3
Peaxi162Scf00338g00629 Petunia axillaris HOM05D005268 ORTHO05D000493 5.2e-13 79.0 228 32.5
Nitab4.5_0012602g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 8.8e-13 78.2 187 31.6
Nitab4.5_0001915g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.0e-12 77.0 365 23.8
Peaxi162Scf00136g02210 Petunia axillaris HOM05D005268 ORTHO05D000493 2.6e-12 76.6 179 34.6
Nitab4.5_0001915g0070 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.3e-12 76.3 150 37.3
PGSC0003DMG400039455 Solanum tuberosum HOM05D001396 ORTHO05D000493 5.7e-12 75.5 170 32.4
PGSC0003DMG400027796 Solanum tuberosum HOM05D000147 ORTHO05D004360 9.7e-12 74.7 74 51.4
PGSC0003DMG400021962 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.3e-11 74.3 245 30.6
CAN.G726.16 Capsicum annuum HOM05D005268 ORTHO05D000493 4.8e-11 72.4 262 29.0
Nitab4.5_0010157g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.3e-11 72.0 210 30.0
Peaxi162Scf01070g00031 Petunia axillaris HOM05D005268 ORTHO05D000493 6.3e-11 72.0 227 29.5
Nitab4.5_0002580g0060 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.4e-10 70.1 268 26.5
CAN.G1026.2 Capsicum annuum HOM05D005268 ORTHO05D000493 3.1e-10 69.7 245 27.8
Nitab4.5_0005678g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.1e-10 69.7 228 28.5
Peaxi162Scf01070g00030 Petunia axillaris HOM05D001396 ORTHO05D000493 7.0e-10 68.6 237 30.8
Nitab4.5_0011431g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.2e-09 67.8 197 29.9
Peaxi162Scf00168g01126 Petunia axillaris HOM05D005268 ORTHO05D000493 7.7e-09 65.1 229 31.0
Peaxi162Scf00066g01218 Petunia axillaris HOM05D005268 ORTHO05D000493 1.7e-08 63.9 193 31.6
Nitab4.5_0002719g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.1e-07 61.2 214 28.5
Nitab4.5_0002580g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.5e-07 60.8 233 29.2
Solyc04g057950.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.9e-07 60.5 230 27.4
Sopen04g025810 Solanum pennellii HOM05D001396 ORTHO05D000493 1.9e-07 60.5 230 27.4
Nitab4.5_0014138g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.2e-07 59.7 136 30.1
PGSC0003DMG400006248 Solanum tuberosum HOM05D005268 ORTHO05D000493 7.2e-07 58.5 40 65.0
CAN.G535.4 Capsicum annuum HOM05D001396 ORTHO05D000493 9.4e-07 58.2 102 39.2
Peaxi162Scf00613g00065 Petunia axillaris HOM05D005268 ORTHO05D000493 9.4e-07 58.2 239 26.8
PGSC0003DMG400037653 Solanum tuberosum HOM05D001396 ORTHO05D000493 2.1e-06 57.0 98 37.8
Nitab4.5_0008803g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.6e-06 56.2 127 33.9
Nitab4.5_0013834g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.6e-06 56.2 102 41.2
Nitab4.5_0005834g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.1e-06 55.5 188 28.7
Solyc04g072320.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 8.0e-06 55.1 82 31.7


User provided reference genes

Program Settings