Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g056590.2 Solanum lycopersicum HOM05D005482 ORTHO05D006502 8.2e-73 276.9 139 100.0
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 3.7e-65 251.5 127 96.9
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 4.8e-65 251.1 127 96.1
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 4.0e-59 231.5 127 89.0
Solyc11g016980.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.4e-56 223.0 120 92.5
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 6.4e-49 197.6 127 78.0
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 8.3e-49 197.2 127 77.2
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 8.3e-49 197.2 127 78.7
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 1.7e-41 172.9 131 64.9
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 3.3e-37 158.7 127 65.4
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 4.3e-37 158.3 127 61.4
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 4.3e-37 158.3 127 60.6
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 1.2e-36 156.8 127 61.4
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 2.8e-36 155.6 127 63.8
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.8e-36 155.6 131 58.0
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 1.1e-35 153.7 129 62.0
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 1.4e-35 153.3 127 59.8
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 1.2e-34 150.2 128 62.5
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 1.5e-34 149.8 129 59.7
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.5e-34 149.8 129 59.7
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 1.5e-34 149.8 127 59.1
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 2.6e-34 149.1 130 58.5
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 3.4e-34 148.7 129 58.9
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 4.4e-34 148.3 134 56.0
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 7.5e-34 147.5 115 61.7
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 9.8e-34 147.1 133 53.4
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 1.3e-33 146.7 128 60.2
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 1.7e-33 146.4 134 56.0
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.7e-33 146.4 129 58.1
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 2.2e-33 146.0 130 58.5
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 2.2e-33 146.0 126 58.7
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 2.9e-33 145.6 132 56.1
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.9e-33 145.6 129 58.1
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 2.9e-33 145.6 127 59.8
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 3.7e-33 145.2 135 56.3
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 4.9e-33 144.8 127 58.3
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.9e-32 142.9 128 57.0
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 2.4e-32 142.5 132 56.1
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 2.4e-32 142.5 127 59.8
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 4.1e-32 141.7 134 56.7
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 5.4e-32 141.4 127 56.7
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 5.4e-32 141.4 127 56.7
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 9.2e-32 140.6 136 53.7
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 9.2e-32 140.6 128 56.2
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 2.1e-31 139.4 135 54.1
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 2.1e-31 139.4 128 55.5
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 2.1e-31 139.4 127 57.5
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 2.7e-31 139.0 120 58.3
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 6.0e-31 137.9 129 54.3
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 7.8e-31 137.5 136 52.2
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 1.3e-30 136.7 136 52.2
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 1.7e-30 136.3 118 57.6
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 1.7e-30 136.3 143 51.7
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 3.0e-30 135.6 125 57.6
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 6.6e-30 134.4 127 56.7
Haze_03887 Corylus avellana HOM05D005482 ORTHO05D006502 8.6e-30 134.0 117 55.6
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 8.6e-30 134.0 127 52.8
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 8.6e-30 134.0 119 57.1
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 8.6e-30 134.0 127 56.7
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 1.5e-29 133.3 128 57.8
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 1.5e-29 133.3 119 56.3
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 1.9e-29 132.9 136 53.7
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 1.9e-29 132.9 137 54.7
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 1.9e-29 132.9 127 55.9
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 2.5e-29 132.5 138 52.2
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 4.3e-29 131.7 133 54.1
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 4.3e-29 131.7 94 67.0
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 1.6e-28 129.8 105 61.0
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 2.8e-28 129.0 127 53.5
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 2.8e-28 129.0 127 52.8
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 3.6e-28 128.6 133 52.6
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 8.1e-28 127.5 129 54.3
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 1.5e-26 123.2 128 53.9
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 2.6e-26 122.5 128 53.1
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 7.6e-26 120.9 124 57.3
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 2.2e-25 119.4 131 48.9
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 2.2e-25 119.4 131 48.9
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 3.7e-25 118.6 103 59.2
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 4.9e-25 118.2 124 57.3
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 1.1e-24 117.1 101 57.4
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 1.9e-24 116.3 101 56.4
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 3.2e-24 115.5 106 54.7
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 4.1e-24 115.2 94 59.6
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 7.1e-24 114.4 128 50.8
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 7.1e-24 114.4 128 50.8
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 7.1e-24 114.4 125 51.2
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 9.2e-24 114.0 94 62.8
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 1.6e-23 113.2 101 58.4
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 1.6e-23 113.2 135 52.6
CiPaw.01G172300 Carya illinoinensis HOM05D005482 ORTHO05D006502 4.6e-23 111.7 146 45.2
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 6.0e-23 111.3 121 51.2
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 1.0e-22 110.5 106 52.8
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 1.3e-22 110.2 118 50.0
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 1.3e-22 110.2 118 50.0
CiPaw.10G105100 Carya illinoinensis HOM05D005482 ORTHO05D006502 5.1e-22 108.2 91 57.1
TPR.G7258 Trifolium pratense HOM05D005482 ORTHO05D006502 6.6e-22 107.8 94 57.4
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 4.3e-21 105.1 134 42.5
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 3.1e-19 99.0 93 52.7
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 3.1e-19 99.0 116 48.3
CDE07G2034 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 4.0e-19 98.6 80 58.8
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 1.5e-18 96.7 102 52.0
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 3.4e-18 95.5 128 43.0
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 7.6e-18 94.4 97 53.6
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 2.9e-17 92.4 128 47.7
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 3.8e-17 92.0 93 52.7
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 1.9e-16 89.7 110 46.4
CiPaw.03G215800 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.7e-15 85.9 56 69.6
HanXRQChr04g0112001 Helianthus annuus HOM05D005482 ORTHO05D006502 5.1e-14 81.6 75 58.7
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 1.5e-13 80.1 104 41.3
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 1.6e-12 76.6 107 42.1
Pp3c20_16050 Physcomitrium patens HOM05D005482 ORTHO05D006502 8.1e-12 74.3 100 41.0
Solyc02g062813.1 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.1e-11 73.9 37 94.6
SMO203G0252 Selaginella moellendorffii HOM05D005482 ORTHO05D006502 5.3e-11 71.6 98 40.8
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 1.9e-08 63.2 45 62.2
AagrBONN_evm.TU.Sc2ySwM_117.475 Anthoceros agrestis HOM05D005482 ORTHO05D006502 3.2e-08 62.4 113 35.4
Mapoly0105s0033 Marchantia polymorpha HOM05D005482 ORTHO05D006502 4.2e-08 62.0 113 35.4
Sabra15G0079600 Salix brachista HOM05D005482 ORTHO05D006502 1.2e-07 60.5 64 53.1
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 2.3e-06 56.2 146 28.8


User provided reference genes

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