Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g049820.2 Solanum lycopersicum HOM05D000141 ORTHO05D004038 1.7e-238 828.9 422 100.0
Sopen10g006400 Solanum pennellii HOM05D000141 ORTHO05D004038 6.1e-228 793.9 422 96.4
PGSC0003DMG400017831 Solanum tuberosum HOM05D000141 ORTHO05D004038 7.5e-210 733.8 428 90.2
Nitab4.5_0000890g0100 Nicotiana tabacum HOM05D000141 ORTHO05D004038 6.0e-167 591.3 432 73.6
Nitab4.5_0000075g0090 Nicotiana tabacum HOM05D000141 ORTHO05D004038 9.9e-146 520.8 392 71.4
Peaxi162Scf01181g00014 Petunia axillaris HOM05D000141 ORTHO05D004038 4.9e-145 518.5 428 66.4
Dinv06246 Davidia involucrata HOM05D000141 ORTHO05D004038 6.4e-44 182.6 466 33.7
Dinv15520 Davidia involucrata HOM05D000141 ORTHO05D004038 6.4e-44 182.6 466 33.7
Actinidia16225 Actinidia chinensis HOM05D000141 ORTHO05D004038 9.9e-37 158.7 457 33.9
Atru.chr3.2046 Acer truncatum HOM05D000141 ORTHO05D004038 2.7e-34 150.6 464 30.0
Cfa009525 Carpinus fangiana HOM05D000141 ORTHO05D004038 3.5e-34 150.2 455 30.5
Haze_22916 Corylus avellana HOM05D000141 ORTHO05D004038 1.3e-33 148.3 466 30.3
Potri.001G000800 Populus trichocarpa HOM05D000141 ORTHO05D004038 5.8e-29 132.9 463 28.1
TWI34G1411 Tripterygium wilfordii HOM05D000141 ORTHO05D004038 4.9e-28 129.8 462 29.0
GSVIVG01025512001 Vitis vinifera HOM05D000141 ORTHO05D004038 8.4e-28 129.0 193 38.9
Potri.003G223800 Populus trichocarpa HOM05D000141 ORTHO05D004038 1.1e-27 128.6 463 26.6
TWI32G0986 Tripterygium wilfordii HOM05D000141 ORTHO05D004038 1.2e-26 125.2 420 29.0
Prupe.6G000800 Prunus persica HOM05D000141 ORTHO05D004038 6.7e-25 119.4 476 27.3
Sabra01G0000700 Salix brachista HOM05D000141 ORTHO05D004038 1.9e-24 117.9 453 26.5
Sabra03G0166200 Salix brachista HOM05D000141 ORTHO05D004038 3.3e-24 117.1 470 24.9
Thecc.09G206200 Theobroma cacao HOM05D000141 ORTHO05D004038 5.6e-24 116.3 456 28.1
RcHm_v2.0_Chr5g0084121 Rosa chinensis HOM05D000141 ORTHO05D004038 4.8e-23 113.2 463 27.9
Manes.15G111300 Manihot esculenta HOM05D000141 ORTHO05D004038 8.2e-23 112.5 175 38.3
QL01p007777 Quercus lobata HOM05D000141 ORTHO05D004038 8.2e-23 112.5 457 26.3
Ciclev10014163m.g Citrus clementina HOM05D000141 ORTHO05D004038 1.1e-22 112.1 473 25.6
COL.COLO4_35062 Corchorus olitorius HOM05D000141 ORTHO05D004038 1.1e-22 112.1 457 27.4
Duzib170G0369 Durio zibethinus HOM05D000141 ORTHO05D004038 6.9e-22 109.4 461 26.9
FAN16G0239 Fragaria x ananassa HOM05D000141 ORTHO05D004038 2.6e-21 107.5 473 26.2
MD03G1001300 Malus domestica HOM05D000141 ORTHO05D004038 1.7e-20 104.8 461 26.7
FvH4_3g46040 Fragaria vesca HOM05D000141 ORTHO05D004038 2.2e-20 104.4 473 27.3
Cpa.g.sc119.9 Carica papaya HOM05D000141 ORTHO05D004038 2.9e-20 104.0 444 26.8
TAR633G0592 Trochodendron aralioides HOM05D000141 ORTHO05D004038 1.4e-19 101.7 217 33.6
CiPaw.13G179500 Carya illinoinensis HOM05D000141 ORTHO05D004038 6.0e-18 96.3 435 27.1
Nn7g35786 Nelumbo nucifera HOM05D000141 ORTHO05D004038 1.0e-17 95.5 494 26.7
Nn7g35784 Nelumbo nucifera HOM05D000141 ORTHO05D004038 1.1e-16 92.0 494 26.1
Rhsim13G0235100 Rhododendron simsii HOM05D000141 ORTHO05D004038 2.5e-16 90.9 232 33.6
vmacro04278 Vaccinium macrocarpon HOM05D000141 ORTHO05D004038 1.6e-15 88.2 244 33.2
PGR102G2537 Punica granatum HOM05D000141 ORTHO05D004038 8.2e-15 85.9 426 27.9
PSO339G4380 Papaver somniferum HOM05D000141 ORTHO05D004038 5.3e-14 83.2 214 30.4
PSO384G3803 Papaver somniferum HOM05D000141 ORTHO05D004038 6.9e-14 82.8 214 30.8
Gohir.A08G082800 Gossypium hirsutum HOM05D000141 ORTHO05D004038 2.0e-13 81.3 447 25.1
FAN21G0611 Fragaria x ananassa HOM05D000141 ORTHO05D004038 3.4e-13 80.5 421 25.4
Gorai.004G097800 Gossypium raimondii HOM05D000141 ORTHO05D004038 5.9e-13 79.7 460 24.6
Gohir.D08G092200 Gossypium hirsutum HOM05D000141 ORTHO05D004038 5.0e-12 76.6 180 34.4
MBI13_g02426_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004038 1.2e-10 72.0 222 33.3
Eucgr.B03582 Eucalyptus grandis HOM05D000141 ORTHO05D004038 3.9e-09 67.0 178 28.7
Nn7g35771 Nelumbo nucifera HOM05D000141 ORTHO05D004038 5.1e-09 66.6 457 24.7
THA.LOC104822687 Tarenaya hassleriana HOM05D000141 ORTHO05D004038 3.7e-07 60.5 426 24.2
FAN11G3403 Fragaria x ananassa HOM05D000141 ORTHO05D004038 6.3e-07 59.7 150 34.7


User provided reference genes

Program Settings