Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g034210.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.4e-78 296.2 152 100.0
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 1.9e-30 136.3 112 64.3
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 1.2e-29 133.7 113 61.9
Sopen01g017880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-20 103.2 63 90.5
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.5e-19 97.8 114 45.6
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.9e-18 95.1 125 44.0
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 1.8e-17 93.2 100 50.0
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.1e-17 92.4 106 47.2
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.4e-17 91.7 106 47.2
Peaxi162Scf00203g00072 Petunia axillaris HOM05D000002 ORTHO05D000001 1.6e-16 90.1 104 42.3
Nitab4.5_0000040g0220 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.9e-14 83.2 100 54.0
Nitab4.5_0001699g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.8e-13 79.3 58 72.4
Nitab4.5_0000027g0330 Nicotiana tabacum HOM05D000002 ORTHO05D000001 4.7e-13 78.6 108 38.9
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.8e-12 76.6 105 40.0
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.2e-12 75.1 103 39.8
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.2e-11 73.9 100 38.0
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.2e-11 73.9 100 38.0
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.6e-11 72.8 107 39.3
Migut.D01784 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.7e-11 71.6 69 55.1
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.5e-11 71.2 102 39.2
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.8e-11 70.9 102 38.2
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-10 70.5 121 33.1
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 2.2e-10 69.7 100 39.0
Nitab4.5_0000243g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.9e-10 69.3 58 63.8
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 4.9e-10 68.6 104 38.5
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.3e-10 67.8 107 38.3
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-09 67.0 74 44.6
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-09 66.6 117 35.0
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.4e-09 66.2 100 37.0
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 3.2e-09 65.9 104 37.5
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-09 65.5 100 34.0
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.1e-09 65.5 100 34.0
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 4.1e-09 65.5 137 31.4
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 5.4e-09 65.1 74 43.2
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 7.0e-09 64.7 104 36.5
Solyc12g038100.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 7.0e-09 64.7 91 38.5
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 9.2e-09 64.3 101 33.7
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-08 63.9 99 35.4
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-08 63.9 99 35.4
Sopen06g015160 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 77 40.3
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.0e-08 63.2 76 38.2
Solyc06g033930.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.0e-08 63.2 61 50.8
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 74 39.2
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 74 39.2
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-08 62.8 74 39.2
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.7e-08 62.8 98 38.8
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 4.6e-08 62.0 76 36.8
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 4.6e-08 62.0 118 28.8
ECA238G0397 Erigeron canadensis HOM05D000152 ORTHO05D000609 5.9e-08 61.6 86 39.5
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-08 61.6 100 31.0
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-08 61.6 143 30.8
Hma1.2p1_0718F.1_g208440 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-08 61.6 102 37.3
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.9e-08 61.6 74 39.2
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 7.8e-08 61.2 103 32.0
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 7.8e-08 61.2 100 31.0
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 7.8e-08 61.2 98 35.7
Sopen06g014070 Solanum pennellii HOM05D000006 ORTHO05D000001 7.8e-08 61.2 91 37.4
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-08 61.2 74 37.8
Sabra15G0060800 Salix brachista HOM05D000113 ORTHO05D000001 1.0e-07 60.8 114 32.5
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 74 36.5
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 100 35.0
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 1.3e-07 60.5 74 41.9
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.1 74 37.8
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 1.7e-07 60.1 102 35.3
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 59.7 101 41.6
TWI59G1343 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.3e-07 59.7 75 42.7
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 59.3 77 33.8
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.0e-07 59.3 74 37.8
ECA233G3870 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 70 37.1
Sp1g37055 Schrenkiella parvula HOM05D000002 ORTHO05D000001 3.9e-07 58.9 139 28.8
THA.LOC104798820 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.9e-07 58.9 99 33.3
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.0e-07 58.5 113 33.6
ECA232G4656 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-07 58.5 96 38.5
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.0e-07 58.5 112 34.8
Nitab4.5_0002521g0050 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.0e-07 58.5 90 40.0
THA.LOC109116072 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.0e-07 58.5 74 35.1
CSS0031818 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-07 58.2 100 38.0
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 6.6e-07 58.2 105 33.3
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.6e-07 58.2 102 35.3
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-07 58.2 74 33.8
Sopen11g010440 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-07 58.2 102 35.3
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.6e-07 58.2 74 35.1
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.6e-07 58.2 74 36.5
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.6e-07 57.8 100 33.0
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 8.6e-07 57.8 102 33.3
Sopen03g005290 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-07 57.8 74 35.1
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-07 57.8 73 35.6
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-06 57.4 102 35.3
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 101 33.7
Sabra05G0005600 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-06 57.4 114 32.5
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-06 57.0 98 34.7
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-06 57.0 98 34.7
Peaxi162Scf00404g00036 Petunia axillaris HOM05D000002 ORTHO05D000001 1.5e-06 57.0 82 37.8
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 1.5e-06 57.0 100 36.0
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 74 36.5
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 78 39.7
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 100 29.0
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 100 29.0
Nitab4.5_0000090g0030 Nicotiana tabacum HOM05D000395 ORTHO05D000088 1.9e-06 56.6 45 60.0
Nitab4.5_0000090g0070 Nicotiana tabacum HOM05D000395 ORTHO05D000088 1.9e-06 56.6 45 62.2
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.9e-06 56.6 74 35.1
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-06 56.2 98 32.7
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-06 56.2 70 35.7
Sopen01g010580 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 56.2 102 34.3
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-06 55.8 73 37.0
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.8 74 33.8
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 4.3e-06 55.5 101 28.7
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 4.3e-06 55.5 76 35.5
Solyc02g030370.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.3e-06 55.5 147 27.9
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 36.2
Hma1.2p1_0763F.1_g214730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-06 55.1 66 40.9
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 5.6e-06 55.1 102 35.3
Sopen01g050910 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen03g026870 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen03g027590 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 31.4
Sopen08g016690 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen08g017760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen10g019670 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen10g024340 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen11g006290 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Sopen11g022120 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 35.2
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 7.3e-06 54.7 76 36.8
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 7.3e-06 54.7 100 33.0
Hma1.2p1_1510F.1_g287820 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.3e-06 54.7 74 33.8
Sabra04G0090100 Salix brachista HOM05D000002 ORTHO05D000001 7.3e-06 54.7 100 35.0
Sabra11G0106600 Salix brachista HOM05D000002 ORTHO05D000001 7.3e-06 54.7 100 35.0
Sopen01g012150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-06 54.7 103 35.0
Sopen07g019840 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-06 54.7 104 35.6
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.3e-06 54.7 74 36.5
THA.LOC109116754 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.3e-06 54.7 74 33.8
Hma1.2p1_0207F.1_g088070 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.5e-06 54.3 82 35.4
QL03p028934 Quercus lobata HOM05D000002 ORTHO05D000001 9.5e-06 54.3 75 34.7
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 9.5e-06 54.3 104 35.6
TPR.G27008 Trifolium pratense HOM05D000002 ORTHO05D000001 9.5e-06 54.3 73 35.6


User provided reference genes

Program Settings