Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 2.0e-161 572.4 292 100.0
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.3e-157 559.7 292 97.3
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.8e-146 522.7 296 89.9
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 2.5e-132 475.7 303 81.8
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.8e-130 469.5 304 81.2
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 2.5e-124 449.1 299 79.6
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 5.7e-100 368.2 269 72.1
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.6e-97 360.1 282 67.0
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 1.3e-96 357.1 295 65.1
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.7e-96 356.7 300 63.3
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 8.5e-96 354.4 287 68.3
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.5e-95 353.6 287 67.9
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 2.5e-95 352.8 200 84.5
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 5.5e-95 351.7 233 75.5
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 7.2e-95 351.3 248 70.6
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 9.4e-95 350.9 198 83.8
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 3.6e-94 349.0 199 81.9
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 8.0e-94 347.8 302 64.6
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 1.4e-93 347.1 290 66.2
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.8e-93 346.7 202 80.7
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 4.0e-93 345.5 200 83.0
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 4.0e-93 345.5 214 79.9
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 4.0e-93 345.5 304 61.2
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 5.2e-93 345.1 234 73.5
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 5.2e-93 345.1 198 82.3
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 6.8e-93 344.7 278 63.7
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.2e-92 344.0 279 65.6
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.5e-92 343.6 278 63.7
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 1.5e-92 343.6 276 64.9
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 2.6e-92 342.8 249 69.1
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 3.4e-92 342.4 278 63.3
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 7.5e-92 341.3 220 75.5
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 9.8e-92 340.9 283 66.1
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 2.2e-91 339.7 200 80.5
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 2.2e-91 339.7 284 64.4
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.8e-91 339.3 291 63.2
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.8e-91 338.6 286 64.7
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 6.3e-91 338.2 218 75.7
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 1.4e-90 337.0 253 66.0
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.4e-90 337.0 297 62.6
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.4e-90 337.0 293 63.5
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.8e-90 336.7 253 66.8
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.1e-90 335.9 293 63.5
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 5.4e-90 335.1 216 75.0
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 5.4e-90 335.1 216 75.0
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 1.2e-89 334.0 293 61.8
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.6e-89 333.6 283 62.2
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 2.0e-89 333.2 216 74.5
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 2.0e-89 333.2 279 63.8
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 2.7e-89 332.8 219 72.6
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.5e-89 332.4 198 77.8
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 3.5e-89 332.4 292 61.6
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 3.5e-89 332.4 221 71.0
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.3e-88 330.5 232 70.3
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.3e-88 330.5 290 61.4
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.3e-88 330.5 216 73.6
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.7e-88 330.1 216 73.1
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 2.2e-88 329.7 218 72.9
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.2e-88 329.7 285 63.9
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 3.8e-88 328.9 276 63.4
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 3.8e-88 328.9 275 62.5
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 5.0e-88 328.6 275 62.5
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 5.0e-88 328.6 286 63.6
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 5.0e-88 328.6 287 61.7
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.5e-87 327.0 218 72.0
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.9e-87 326.6 274 63.1
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 4.2e-87 325.5 279 63.1
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 5.5e-87 325.1 277 61.0
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 5.5e-87 325.1 279 62.4
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.6e-86 323.6 275 60.4
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.6e-86 322.4 265 63.0
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 4.7e-86 322.0 296 60.1
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 4.7e-86 322.0 201 76.1
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 1.8e-85 320.1 222 71.2
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.2e-84 317.4 201 75.1
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 4.4e-84 315.5 276 61.2
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 4.4e-84 315.5 294 60.5
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.6e-81 307.0 199 75.9
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.3e-80 303.1 204 71.6
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 7.3e-79 298.1 277 59.6
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 2.3e-77 293.1 199 72.4
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 5.2e-77 292.0 208 68.8
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 2.0e-76 290.0 232 60.3
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.4e-74 283.9 230 61.3
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.4e-74 283.1 213 65.7
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 3.2e-74 282.7 216 63.4
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 4.1e-74 282.3 180 74.4
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 7.0e-74 281.6 197 65.5
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 4.3e-71 272.3 275 53.8
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 2.1e-70 270.0 240 61.2
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.0e-69 267.7 171 75.4
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 4.0e-69 265.8 179 72.1
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 6.8e-69 265.0 273 57.1
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 2.8e-62 243.0 210 59.0
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 3.4e-60 236.1 250 56.0
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.9e-59 233.0 219 57.5
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.2e-57 227.6 139 78.4
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 5.1e-56 222.2 156 69.2
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 4.9e-51 205.7 203 50.7
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 2.2e-43 180.3 148 62.8
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 5.1e-40 169.1 197 44.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 6.6e-40 168.7 108 75.9
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 1.7e-35 154.1 96 76.0
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 3.2e-34 149.8 296 34.8
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.1e-33 147.1 82 81.7
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 4.6e-33 146.0 110 60.9
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 6.0e-33 145.6 169 51.5
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 2.8e-30 136.7 163 50.9
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 3.1e-29 133.3 205 36.6
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 3.8e-27 126.3 77 80.5
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.1e-25 120.6 105 55.2
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 5.8e-20 102.4 70 74.3
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.7e-19 100.9 182 40.7
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.5e-18 97.1 65 66.2
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 2.3e-16 90.5 59 72.9
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.5e-15 87.8 65 60.0
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.5e-15 87.8 58 69.0
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 3.1e-13 80.1 47 74.5
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.9e-08 63.2 41 68.3
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 8.2e-06 55.5 60 43.3


User provided reference genes

Program Settings