Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g021620.3 Solanum lycopersicum HOM05D000180 ORTHO05D000099 5.2e-33 143.7 67 100.0
PGSC0003DMG400005426 Solanum tuberosum HOM05D000180 ORTHO05D000099 4.2e-14 80.9 111 46.8
Sopen01g016180 Solanum pennellii HOM05D000180 ORTHO05D000099 9.3e-14 79.7 111 46.8
Nitab4.5_0000488g0010 Nicotiana tabacum HOM05D000180 ORTHO05D000099 3.5e-13 77.8 111 45.0
Sopen01g016230 Solanum pennellii HOM05D000002 ORTHO05D009932 3.5e-13 77.8 39 87.2
Nitab4.5_0002733g0020 Nicotiana tabacum HOM05D000180 ORTHO05D000099 4.6e-13 77.4 111 45.0
Solyc01g021600.4 Solanum lycopersicum HOM05D000180 ORTHO05D000099 1.0e-12 76.3 107 45.8
Nitab4.5_0009614g0010 Nicotiana tabacum HOM05D000180 ORTHO05D000099 1.3e-12 75.9 111 44.1
CAN.G190.10 Capsicum annuum HOM05D000180 ORTHO05D000099 3.0e-12 74.7 111 45.0
Peaxi162Scf00336g00132 Petunia axillaris HOM05D000180 ORTHO05D000099 2.1e-10 68.6 106 42.5
Peaxi162Scf00100g00093 Petunia axillaris HOM05D000180 ORTHO05D000099 1.1e-09 66.2 95 43.2
Ciclev10017797m.g Citrus clementina HOM05D000180 ORTHO05D000099 4.5e-08 60.8 98 36.7
Cfa009616 Carpinus fangiana HOM05D000180 ORTHO05D000099 1.0e-07 59.7 111 37.8
CAN.G190.8 Capsicum annuum HOM05D000180 ORTHO05D000099 1.3e-07 59.3 109 37.6
Solyc01g017540.2 Solanum lycopersicum HOM05D000180 ORTHO05D000099 1.3e-07 59.3 31 77.4
Rhsim13G0229400 Rhododendron simsii HOM05D000180 ORTHO05D000099 2.2e-07 58.5 111 36.9
Lj1P461T10 Lonicera japonica HOM05D000180 ORTHO05D000099 2.9e-07 58.2 111 36.0
Nitab4.5_0000775g0130 Nicotiana tabacum HOM05D000180 ORTHO05D000099 2.9e-07 58.2 109 37.6
THA.LOC104811060 Tarenaya hassleriana HOM05D000180 ORTHO05D000099 2.9e-07 58.2 111 36.9
CiPaw.13G172400 Carya illinoinensis HOM05D000180 ORTHO05D000099 3.8e-07 57.8 111 36.0
Prupe.6G010400 Prunus persica HOM05D000180 ORTHO05D000099 3.8e-07 57.8 96 37.5
TPR.G5255 Trifolium pratense HOM05D000180 ORTHO05D000099 3.8e-07 57.8 111 36.0
CiPaw.14G131000 Carya illinoinensis HOM05D000180 ORTHO05D000099 4.9e-07 57.4 110 35.5
CiPaw.14G132700 Carya illinoinensis HOM05D000180 ORTHO05D000099 4.9e-07 57.4 110 35.5
CiPaw.14G133400 Carya illinoinensis HOM05D000180 ORTHO05D000099 4.9e-07 57.4 110 35.5
AT1G58170 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 6.5e-07 57.0 111 35.1
Lalb_Chr07g0190941 Lupinus albus HOM05D000180 ORTHO05D000099 6.5e-07 57.0 111 35.1
TAR623G1662 Trochodendron aralioides HOM05D000180 ORTHO05D000099 6.5e-07 57.0 109 33.9
Aqoxy1G00062 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 1.1e-06 56.2 111 34.2
CiPaw.13G172100 Carya illinoinensis HOM05D000180 ORTHO05D000099 1.1e-06 56.2 112 33.0
Nitab4.5_0001620g0070 Nicotiana tabacum HOM05D000180 ORTHO05D000099 1.1e-06 56.2 109 38.5
Oeu023938.1 Olea europaea HOM05D000180 ORTHO05D000099 1.1e-06 56.2 111 34.2
VMungo0331G0412 Vigna mungo HOM05D000180 ORTHO05D000099 1.1e-06 56.2 111 36.0
Ciclev10016828m.g Citrus clementina HOM05D000180 ORTHO05D000099 1.4e-06 55.8 111 34.2
Sc09g0000280 Simmondsia chinensis HOM05D000180 ORTHO05D000099 1.4e-06 55.8 111 34.2
EL10Ac4g10346 Beta vulgaris HOM05D000180 ORTHO05D000099 1.9e-06 55.5 111 34.2
CANSAT64G1831 Cannabis sativa HOM05D000180 ORTHO05D000099 2.5e-06 55.1 109 33.0
CiPaw.14G133600 Carya illinoinensis HOM05D000180 ORTHO05D000099 2.5e-06 55.1 111 33.3
Glyma.03G044300 Glycine max HOM05D000180 ORTHO05D000099 2.5e-06 55.1 111 35.1
RcHm_v2.0_Chr5g0080641 Rosa chinensis HOM05D000180 ORTHO05D000099 2.5e-06 55.1 95 38.9
SalBow3G1092 Salvia bowleyana HOM05D000180 ORTHO05D000099 2.5e-06 55.1 111 35.1
Carub.0002s0646 Capsella rubella HOM05D000180 ORTHO05D000099 3.2e-06 54.7 111 36.0
AUR62019201 Chenopodium quinoa HOM05D000180 ORTHO05D000099 3.2e-06 54.7 111 34.2
Oeu023939.1 Olea europaea HOM05D000180 ORTHO05D000099 3.2e-06 54.7 111 34.2
Phvul.010G063400 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 3.2e-06 54.7 111 34.2
QL01p010364 Quercus lobata HOM05D000180 ORTHO05D000099 3.2e-06 54.7 110 32.7
PGR119G1936 Punica granatum HOM05D000180 ORTHO05D000099 4.2e-06 54.3 111 33.3
BcaC06g31783 Brassica carinata HOM05D000180 ORTHO05D000099 5.5e-06 53.9 109 35.8
Haze_22987 Corylus avellana HOM05D000180 ORTHO05D000099 5.5e-06 53.9 106 34.9
Duzib106G2046 Durio zibethinus HOM05D000180 ORTHO05D000099 5.5e-06 53.9 67 41.8
Medtr4g013320 Medicago truncatula HOM05D000180 ORTHO05D000099 5.5e-06 53.9 111 31.5
Solyc01g006055.1 Solanum lycopersicum HOM05D000180 ORTHO05D000099 5.5e-06 53.9 111 36.9
TPR.G5206 Trifolium pratense HOM05D000180 ORTHO05D000099 5.5e-06 53.9 111 33.3
Cc01_g01210 Coffea canephora HOM05D000180 ORTHO05D000099 7.1e-06 53.5 111 34.2
ECA248G0414 Erigeron canadensis HOM05D000180 ORTHO05D000099 7.1e-06 53.5 111 33.3
Migut.K00024 Erythranthe guttata HOM05D000180 ORTHO05D000099 7.1e-06 53.5 99 36.4
Thhalv10023714m.g Eutrema salsugineum HOM05D000180 ORTHO05D000099 7.1e-06 53.5 111 35.1
Medtr4g013350 Medicago truncatula HOM05D000180 ORTHO05D000099 7.1e-06 53.5 111 34.2
Psat7g248480 Pisum sativum HOM05D000180 ORTHO05D000099 7.1e-06 53.5 109 33.9
QL01p010346 Quercus lobata HOM05D000180 ORTHO05D000099 7.1e-06 53.5 110 32.7
A03p66540 Brassica napus HOM05D000180 ORTHO05D000099 9.3e-06 53.1 109 34.9
BraA03t15706Z Brassica rapa HOM05D000180 ORTHO05D000099 9.3e-06 53.1 109 34.9
CARHR053910 Cardamine hirsuta HOM05D000180 ORTHO05D000099 9.3e-06 53.1 111 35.1
Glyma.01G127400 Glycine max HOM05D000180 ORTHO05D000099 9.3e-06 53.1 111 35.1
PGR119G0603 Punica granatum HOM05D000180 ORTHO05D000099 9.3e-06 53.1 111 33.3
Sopen01g002060 Solanum pennellii HOM05D000180 ORTHO05D000099 9.3e-06 53.1 111 36.9


User provided reference genes

Program Settings