Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g020323.1 Solanum lycopersicum HOM05D001763 ORTHO05D030655 6.9e-90 334.0 168 100.0
PGSC0003DMG400013598 Solanum tuberosum HOM05D001763 ORTHO05D030655 2.9e-32 142.5 122 63.1
PGSC0003DMG400022158 Solanum tuberosum HOM05D001763 ORTHO05D030655 8.5e-24 114.4 73 75.3
Sopen02g008870 Solanum pennellii HOM05D000017 ORTHO05D030655 1.4e-21 107.1 78 69.2
Sopen01g015260 Solanum pennellii HOM05D000017 ORTHO05D000308 1.4e-18 97.1 50 94.0
Nitab4.5_0011837g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-14 82.4 81 54.3
Nitab4.5_0000497g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-12 77.4 79 51.9
Nitab4.5_0011861g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.4e-12 75.5 186 34.4
Nitab4.5_0004058g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.5e-12 74.7 176 36.9
Nitab4.5_0004859g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-10 70.5 109 38.5
Nitab4.5_0006193g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-10 70.5 116 37.1
Solyc12g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 5.4e-10 68.6 50 64.0
Sopen12g010490 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-10 68.6 119 37.8
Nitab4.5_0000142g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.0e-10 68.2 50 62.0
Sopen10g008780 Solanum pennellii HOM05D000004 ORTHO05D000308 1.2e-09 67.4 50 62.0
Nitab4.5_0004461g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-09 66.6 50 58.0
Nitab4.5_0012705g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-09 65.5 164 29.9
PGSC0003DMG400044492 Solanum tuberosum HOM05D000017 ORTHO05D000308 1.0e-08 64.3 50 62.0
Nitab4.5_0003108g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 63.5 49 63.3
Nitab4.5_0004770g0100 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 63.5 49 63.3
Nitab4.5_0005463g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 63.5 95 42.1
Nitab4.5_0006491g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.3e-08 63.2 47 59.6
Nitab4.5_0010167g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.3e-08 63.2 45 60.0
CAN.G680.9 Capsicum annuum HOM05D000017 ORTHO05D000308 8.6e-08 61.2 74 45.9
Nitab4.5_0001658g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.1e-07 60.8 96 39.6
Sopen06g017240 Solanum pennellii HOM05D000017 ORTHO05D000308 1.5e-07 60.5 48 56.2
Nitab4.5_0000907g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.5e-07 59.7 121 33.1
Nitab4.5_0001256g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.5e-07 59.7 48 56.2
Nitab4.5_0001652g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.5e-07 59.7 52 53.8
Nitab4.5_0000125g0170 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.3e-07 59.3 48 56.2
Nitab4.5_0001180g0200 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.3e-07 59.3 51 49.0
Nitab4.5_0005097g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.3e-07 59.3 100 40.0
Nitab4.5_0008994g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.3e-07 59.3 53 50.9
Nitab4.5_0002472g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.3e-07 58.9 72 41.7
Nitab4.5_0003200g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.3e-07 58.9 48 54.2
Peaxi162Scf01218g00012 Petunia axillaris HOM05D000017 ORTHO05D000308 4.3e-07 58.9 64 43.8
Nitab4.5_0000529g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.6e-07 58.5 48 52.1
Nitab4.5_0003471g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.5 50 54.0
Nitab4.5_0003949g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.5 47 59.6
Nitab4.5_0004252g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.5 46 54.3
Nitab4.5_0004638g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.5 46 54.3
Nitab4.5_0001168g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.3e-07 58.2 99 36.4
Nitab4.5_0000319g0300 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.5e-07 57.8 48 56.2
Peaxi162Scf00101g00054 Petunia axillaris HOM05D000017 ORTHO05D000308 9.5e-07 57.8 48 54.2
Nitab4.5_0000036g0260 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.4 48 54.2
Nitab4.5_0001476g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.4 75 44.0
Nitab4.5_0008055g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.4 74 40.5
Nitab4.5_0011237g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.4 47 53.2
Nitab4.5_0013483g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.4 105 37.1
Nitab4.5_0000049g0110 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.6e-06 57.0 47 53.2
Nitab4.5_0000582g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.6e-06 57.0 68 50.0
Nitab4.5_0001931g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.6e-06 57.0 47 53.2
Nitab4.5_0000612g0200 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.1e-06 56.6 71 40.8
Peaxi162Scf00012g00353 Petunia axillaris HOM05D000017 ORTHO05D000308 2.1e-06 56.6 48 52.1
Nitab4.5_0001004g0100 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.8e-06 56.2 43 58.1
Nitab4.5_0003743g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.8e-06 56.2 50 52.0
Peaxi162Scf00580g00012 Petunia axillaris HOM05D000017 ORTHO05D000308 2.8e-06 56.2 50 48.0
Nitab4.5_0001384g0110 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-06 55.8 48 54.2
Nitab4.5_0005097g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-06 55.8 47 53.2
Nitab4.5_0000472g0350 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.7e-06 55.5 48 47.9
Peaxi162Scf00720g00046 Petunia axillaris HOM05D000017 ORTHO05D000308 4.7e-06 55.5 50 50.0
Nitab4.5_0001215g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.2e-06 55.1 47 53.2
Sopen03g026530 Solanum pennellii HOM05D000017 ORTHO05D000308 6.2e-06 55.1 41 58.5
Nitab4.5_0000465g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 105 35.2
Nitab4.5_0000543g0190 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 47 53.2
Nitab4.5_0000829g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 155 34.2
Nitab4.5_0001926g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 49 53.1
Nitab4.5_0003686g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 49 53.1
Nitab4.5_0009462g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 110 32.7
Solyc01g059885.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 8.0e-06 54.7 47 53.2


User provided reference genes

Program Settings