Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 7.0e-56 220.3 106 100.0
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 6.6e-30 134.0 67 95.5
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 6.6e-30 134.0 67 95.5
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 6.6e-30 134.0 67 95.5
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.6e-30 134.0 67 95.5
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 8.6e-30 133.7 77 83.1
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 8.6e-30 133.7 72 90.3
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 8.6e-30 133.7 72 90.3
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 1.1e-29 133.3 67 94.0
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 1.1e-29 133.3 67 94.0
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.1e-29 133.3 67 94.0
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 1.1e-29 133.3 67 94.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.1e-29 133.3 67 94.0
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.9e-29 132.5 67 94.0
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.3e-29 131.3 67 92.5
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 7.3e-29 130.6 67 91.0
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.2e-28 129.8 67 92.5
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.2e-28 129.8 67 92.5
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.2e-28 129.8 67 92.5
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.6e-28 129.4 67 92.5
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 2.8e-28 128.6 64 95.3
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.8e-28 128.6 67 91.0
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.7e-28 127.9 67 91.0
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 5.2e-27 124.4 67 88.1
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.0e-26 122.5 67 88.1
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 5.8e-26 120.9 67 88.1
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 5.8e-26 120.9 71 85.9
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 7.5e-26 120.6 70 87.1
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 9.8e-26 120.2 67 86.6
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.3e-25 119.8 80 73.8
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.9e-25 118.6 66 86.4
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 1.2e-23 113.2 65 81.5
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 2.0e-23 112.5 55 98.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.5e-23 111.7 70 81.4
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 7.8e-23 110.5 66 83.3
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.0e-22 110.2 67 80.6
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 3.9e-22 108.2 67 76.1
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.0e-22 107.8 67 76.1
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 6.6e-22 107.5 68 80.9
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.1e-21 106.7 72 79.2
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.2e-20 103.2 66 75.8
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.1e-19 98.6 49 93.9
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.1e-19 98.6 49 93.9
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.1e-19 98.6 49 93.9
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 3.1e-19 98.6 49 93.9
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.1e-19 98.6 49 93.9
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 3.1e-19 98.6 49 93.9
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.8e-19 97.4 67 70.1
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.8e-19 97.4 49 91.8
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 8.9e-19 97.1 51 88.2
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.0e-18 95.9 67 68.7
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 2.6e-18 95.5 53 86.8
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 5.8e-18 94.4 49 91.8
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 1.7e-17 92.8 49 87.8
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.7e-17 91.7 49 87.8
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.4e-16 89.7 46 91.3
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.4e-16 89.0 76 65.8
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.1e-16 88.2 54 79.6
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 7.1e-16 87.4 52 78.8
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.2e-15 86.7 52 78.8
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-15 86.3 49 81.6
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.8e-15 84.0 67 65.7
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.3e-14 83.2 41 97.6
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 1.7e-14 82.8 43 93.0
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.7e-14 82.8 70 61.4
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 2.3e-14 82.4 41 95.1
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 2.3e-14 82.4 58 72.4
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-14 81.6 47 85.1
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 5.1e-14 81.3 42 88.1
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 8.6e-14 80.5 54 72.2
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.3e-13 78.2 46 78.3
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 7.3e-13 77.4 41 90.2
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.3e-13 77.4 41 90.2
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.3e-13 77.4 41 90.2
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 2.1e-12 75.9 40 87.5
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.7e-12 74.7 48 70.8
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-11 72.4 70 58.6
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.3e-11 72.4 70 58.6
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 3.1e-11 72.0 42 81.0
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.1e-11 72.0 52 73.1
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 5.2e-11 71.2 41 78.0
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 6.8e-11 70.9 41 87.8
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 6.8e-11 70.9 41 87.8
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 6.8e-11 70.9 41 87.8
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 6.8e-11 70.9 41 87.8
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 6.8e-11 70.9 41 87.8
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 6.8e-11 70.9 41 87.8
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 6.8e-11 70.9 39 82.1
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 6.8e-11 70.9 40 82.5
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 8.9e-11 70.5 41 82.9
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 1.2e-10 70.1 41 80.5
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.4e-10 68.6 55 61.8
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 7.6e-10 67.4 62 61.3
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 9.9e-10 67.0 45 73.3
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.3e-09 66.6 63 54.0
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.1e-08 63.5 32 84.4
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 5.4e-08 61.2 43 74.4
Oeu014166.1 Olea europaea HOM05D000963 ORTHO05D005131 5.4e-08 61.2 36 83.3
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.1e-07 59.3 42 64.3
SGA_v2.0_scaffold43G16403 Striga asiatica HOM05D000457 ORTHO05D000560 2.7e-07 58.9 71 54.9
vmacro21330 Vaccinium macrocarpon HOM05D000963 ORTHO05D014445 3.5e-07 58.5 41 75.6
PGSC0003DMG400003919 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.0e-07 57.8 42 64.3
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 56.2 28 92.9
Oeu043433.1 Olea europaea HOM05D000963 ORTHO05D005131 3.0e-06 55.5 40 65.0


User provided reference genes

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