Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g016530.1 Solanum lycopersicum HOM05D000608 ORTHO05D000444 1.3e-44 182.6 88 100.0
Sopen01g010990 Solanum pennellii HOM05D000608 ORTHO05D000444 5.8e-40 167.2 82 97.6
PGSC0003DMG400015997 Solanum tuberosum HOM05D000608 ORTHO05D000444 3.7e-34 147.9 73 97.3
PGSC0003DMG400031509 Solanum tuberosum HOM05D000608 ORTHO05D000444 1.1e-33 146.4 77 90.9
CAN.G902.4 Capsicum annuum HOM05D000608 ORTHO05D000444 8.7e-28 126.7 73 83.6
Peaxi162Scf00336g00086 Petunia axillaris HOM05D000608 ORTHO05D000444 5.3e-25 117.5 79 73.4
Nitab4.5_0000488g0070 Nicotiana tabacum HOM05D000608 ORTHO05D000444 1.0e-23 113.2 74 70.3
Nitab4.5_0007654g0030 Nicotiana tabacum HOM05D000608 ORTHO05D000444 1.7e-15 85.9 57 68.4
Dinv09760 Davidia involucrata HOM05D000608 ORTHO05D000444 2.7e-13 78.6 92 50.0
TAR629G2330 Trochodendron aralioides HOM05D000608 ORTHO05D000444 1.1e-11 73.2 83 50.6
Lj9C410T5 Lonicera japonica HOM05D000608 ORTHO05D000444 2.0e-11 72.4 80 53.8
QL10p035481 Quercus lobata HOM05D000608 ORTHO05D000444 2.5e-11 72.0 92 48.9
Ciclev10021039m.g Citrus clementina HOM05D000608 ORTHO05D000444 5.7e-11 70.9 85 48.2
Cpa.g.sc124.8 Carica papaya HOM05D000608 ORTHO05D000444 7.4e-11 70.5 82 48.8
QL10p036767 Quercus lobata HOM05D000608 ORTHO05D000444 7.4e-11 70.5 92 47.8
Potri.017G155200 Populus trichocarpa HOM05D000608 ORTHO05D000444 9.7e-11 70.1 85 48.2
CANSAT80G1125 Cannabis sativa HOM05D000608 ORTHO05D000444 1.3e-10 69.7 85 44.7
CiPaw.16G077100 Carya illinoinensis HOM05D000608 ORTHO05D000444 1.3e-10 69.7 82 47.6
Cfa017819 Carpinus fangiana HOM05D000608 ORTHO05D000444 1.7e-10 69.3 82 47.6
Haze_18390 Corylus avellana HOM05D000608 ORTHO05D000444 2.2e-10 68.9 82 47.6
Potri.018G152500 Populus trichocarpa HOM05D000608 ORTHO05D000444 4.8e-10 67.8 85 48.2
Manes.02G118100 Manihot esculenta HOM05D000608 ORTHO05D000444 8.2e-10 67.0 87 46.0
Eucgr.K02341 Eucalyptus grandis HOM05D000608 ORTHO05D000444 1.1e-09 66.6 85 45.9
Duzib084G1189 Durio zibethinus HOM05D000608 ORTHO05D000444 1.4e-09 66.2 87 46.0
Atru.chr9.61 Acer truncatum HOM05D000608 ORTHO05D000444 1.8e-09 65.9 73 50.7
Peaxi162Scf00441g00011 Petunia axillaris HOM05D000608 ORTHO05D000444 1.8e-09 65.9 64 54.7
CDE04G1808 Ceratophyllum demersum HOM05D000608 ORTHO05D000444 2.4e-09 65.5 72 54.2
CsaV3_1G007690 Cucumis sativus L. HOM05D000608 ORTHO05D000444 2.4e-09 65.5 82 45.1
PSO063G0198 Papaver somniferum HOM05D000608 ORTHO05D000444 4.1e-09 64.7 80 47.5
Sabra18G0127500 Salix brachista HOM05D000608 ORTHO05D000444 5.3e-09 64.3 82 46.3
arahy.Tifrunner.gnm1.ann1.02L9SB Arachis hypogaea HOM05D000608 ORTHO05D000444 6.9e-09 63.9 82 47.6
arahy.Tifrunner.gnm1.ann1.SKP2YY Arachis hypogaea HOM05D000608 ORTHO05D000444 6.9e-09 63.9 82 47.6
ClCG01G014640 Citrullus lanatus HOM05D000608 ORTHO05D000444 6.9e-09 63.9 82 45.1
THA.LOC104820723 Tarenaya hassleriana HOM05D000608 ORTHO05D000444 1.2e-08 63.2 75 50.7
Phvul.004G135500 Phaseolus vulgaris HOM05D000608 ORTHO05D000444 1.5e-08 62.8 83 45.8
Sed0020883 Sechium edule HOM05D000608 ORTHO05D000444 1.5e-08 62.8 82 43.9
MELO3C002187.2 Cucumis melo HOM05D000608 ORTHO05D000444 2.0e-08 62.4 70 48.6
PSO782G0130 Papaver somniferum HOM05D000608 ORTHO05D000444 2.6e-08 62.0 80 46.2
PGR044G2519 Punica granatum HOM05D000608 ORTHO05D000444 3.4e-08 61.6 82 40.2
TPR.G8880 Trifolium pratense HOM05D000608 ORTHO05D000444 3.4e-08 61.6 83 44.6
Medtr1g077460 Medicago truncatula HOM05D000608 ORTHO05D000444 4.5e-08 61.2 82 42.7
Lj2g0001814 Lotus japonicus HOM05D000608 ORTHO05D000444 5.9e-08 60.8 82 42.7
HPP92_014424 Vanilla planifolia HOM05D000608 ORTHO05D000444 5.9e-08 60.8 63 58.7
VMungo0464G1433 Vigna mungo HOM05D000608 ORTHO05D000444 5.9e-08 60.8 83 43.4
Manes.01G159500 Manihot esculenta HOM05D000608 ORTHO05D000444 1.0e-07 60.1 73 46.6
GSVIVG01031684001 Vitis vinifera HOM05D000608 ORTHO05D000444 1.0e-07 60.1 82 43.9
Sed0026767 Sechium edule HOM05D000608 ORTHO05D000444 1.3e-07 59.7 70 50.0
Ca_04889_v3 Cicer arietinum L. HOM05D000608 ORTHO05D000444 2.2e-07 58.9 83 38.6
Sp1g15910 Schrenkiella parvula HOM05D000608 ORTHO05D000444 2.2e-07 58.9 74 48.6
Glyma.16G209500 Glycine max HOM05D000608 ORTHO05D000444 3.8e-07 58.2 83 42.2
Medtr6g066280 Medicago truncatula HOM05D000608 ORTHO05D000444 3.8e-07 58.2 73 45.2
Lalb_Chr22g0354131 Lupinus albus HOM05D000608 ORTHO05D000444 5.0e-07 57.8 81 43.2
BcaC07g38885 Brassica carinata HOM05D000608 ORTHO05D000444 8.5e-07 57.0 74 45.9
BcaC07g38886 Brassica carinata HOM05D000608 ORTHO05D000444 8.5e-07 57.0 74 45.9
Glyma.09G160100 Glycine max HOM05D000608 ORTHO05D000444 1.1e-06 56.6 86 41.9
C08p18200 Brassica napus HOM05D000608 ORTHO05D000444 1.4e-06 56.2 74 45.9
BolC8t49455H Brassica oleracea HOM05D000608 ORTHO05D000444 1.4e-06 56.2 74 45.9
Thhalv10009965m.g Eutrema salsugineum HOM05D000608 ORTHO05D000444 1.9e-06 55.8 74 45.9
Nitab4.5_0000635g0060 Nicotiana tabacum HOM05D000608 ORTHO05D000444 1.9e-06 55.8 71 47.9
arahy.Tifrunner.gnm1.ann1.1F61Q2 Arachis hypogaea HOM05D000608 ORTHO05D000444 2.5e-06 55.5 76 40.8
A06p13890 Brassica napus HOM05D000608 ORTHO05D000444 2.5e-06 55.5 70 45.7
BraA06t24530Z Brassica rapa HOM05D000608 ORTHO05D000444 2.5e-06 55.5 70 45.7
THA.LOC104812197 Tarenaya hassleriana HOM05D000608 ORTHO05D000444 2.5e-06 55.5 85 45.9
VMungo0720G0009 Vigna mungo HOM05D000608 ORTHO05D000444 2.5e-06 55.5 69 49.3
ATR0124G051 Amborella trichopoda HOM05D000608 ORTHO05D000444 3.2e-06 55.1 87 42.5
A08p30720 Brassica napus HOM05D000608 ORTHO05D000444 3.2e-06 55.1 74 44.6
BraA08t35002Z Brassica rapa HOM05D000608 ORTHO05D000444 3.2e-06 55.1 74 44.6
Ca_09922_v3 Cicer arietinum L. HOM05D000608 ORTHO05D000444 3.2e-06 55.1 82 42.7
arahy.Tifrunner.gnm1.ann1.46SZIZ Arachis hypogaea HOM05D000608 ORTHO05D000444 4.2e-06 54.7 87 39.1
Carub.0001s1756 Capsella rubella HOM05D000608 ORTHO05D000444 5.5e-06 54.3 74 43.2
Psat1g117120 Pisum sativum HOM05D000608 ORTHO05D000444 5.5e-06 54.3 85 40.0
C05p16210 Brassica napus HOM05D000608 ORTHO05D000444 7.2e-06 53.9 70 45.7
BolC5t30323H Brassica oleracea HOM05D000608 ORTHO05D000444 7.2e-06 53.9 70 45.7
Nitab4.5_0000998g0060 Nicotiana tabacum HOM05D000608 ORTHO05D000444 7.2e-06 53.9 70 47.1
Nitab4.5_0001620g0060 Nicotiana tabacum HOM05D000608 ORTHO05D000444 7.2e-06 53.9 107 38.3
Nitab4.5_0003793g0010 Nicotiana tabacum HOM05D000608 ORTHO05D000444 9.4e-06 53.5 67 47.8
Nitab4.5_0009608g0010 Nicotiana tabacum HOM05D000608 ORTHO05D000444 9.4e-06 53.5 67 47.8
PGSC0003DMG400021665 Solanum tuberosum HOM05D000608 ORTHO05D000444 9.4e-06 53.5 70 47.1


User provided reference genes

Program Settings