Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g016416.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.3e-58 227.3 117 100.0
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 8.2e-50 200.3 109 95.4
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 8.2e-50 200.3 109 95.4
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.2e-50 200.3 109 95.4
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 8.2e-50 200.3 109 95.4
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.2e-50 200.3 109 95.4
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 8.2e-50 200.3 109 95.4
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-48 196.1 109 91.7
Sopen08g019920 Solanum pennellii HOM05D008041 ORTHO05D000385 3.8e-47 191.4 109 90.8
Sopen03g027000 Solanum pennellii HOM05D008041 ORTHO05D000385 2.5e-46 188.7 109 89.0
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 5.2e-44 181.0 109 86.2
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 3.7e-42 174.9 103 86.4
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 6.3e-42 174.1 103 86.4
Sopen03g016060 Solanum pennellii HOM05D008041 ORTHO05D000385 6.3e-34 147.5 101 74.3
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.4e-33 146.4 83 90.4
Sopen01g029200 Solanum pennellii HOM05D008041 ORTHO05D000385 3.6e-29 131.7 84 79.8
Sopen12g015340 Solanum pennellii HOM05D008041 ORTHO05D000385 3.4e-27 125.2 108 63.9
Sopen12g014810 Solanum pennellii HOM05D008041 ORTHO05D000385 7.5e-27 124.0 70 91.4
Sopen02g004250 Solanum pennellii HOM05D000004 ORTHO05D000385 3.7e-26 121.7 75 84.0
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 4.9e-26 121.3 72 87.5
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 1.4e-25 119.8 75 81.3
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 8.0e-21 104.0 55 92.7
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.1e-20 102.1 57 91.2
Solyc08g016563.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 5.2e-20 101.3 55 90.9
Solyc09g014642.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.1e-17 93.6 50 92.0
Solyc05g012827.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.4e-17 93.2 50 92.0
Sopen04g010730 Solanum pennellii HOM05D008041 ORTHO05D000385 2.1e-16 89.4 62 77.4
Sopen12g008090 Solanum pennellii HOM05D000107 ORTHO05D000385 1.2e-13 80.1 45 82.2
Sopen10g021280 Solanum pennellii HOM05D008041 ORTHO05D000385 2.8e-13 79.0 86 58.1
Sopen11g019240 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-12 77.0 66 60.6
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 2.3e-12 75.9 110 44.5
EL10Ac8g19486 Beta vulgaris HOM05D004615 ORTHO05D000385 3.1e-12 75.5 102 40.2
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 3.1e-12 75.5 110 44.5
PGSC0003DMG400006058 Solanum tuberosum HOM05D008041 ORTHO05D000385 4.0e-12 75.1 54 70.4
Hund20282 Selenicereus undatus HOM05D009682 ORTHO05D000385 8.9e-12 73.9 105 42.9
Solyc03g063357.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.5e-11 73.2 48 77.1
PGSC0003DMG400001172 Solanum tuberosum HOM05D008041 ORTHO05D000385 1.5e-11 73.2 46 78.3
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 2.6e-11 72.4 102 42.2
EL10Ac4g08554 Beta vulgaris HOM05D004615 ORTHO05D000385 2.6e-11 72.4 102 39.2
EL10Ac7g17419 Beta vulgaris HOM05D004615 ORTHO05D000385 7.5e-11 70.9 103 38.8
Hund20227 Selenicereus undatus HOM05D009682 ORTHO05D000385 7.5e-11 70.9 105 41.0
Hund20228 Selenicereus undatus HOM05D009682 ORTHO05D000385 7.5e-11 70.9 105 41.0
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 9.9e-11 70.5 103 38.8
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-10 70.1 103 39.8
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-10 70.1 103 39.8
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-10 70.1 103 39.8
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-10 70.1 103 39.8
Hund12531 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.7e-10 69.7 105 41.9
EL10Ac2g02989 Beta vulgaris HOM05D004615 ORTHO05D000385 3.7e-10 68.6 106 39.6
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 3.7e-10 68.6 102 43.1
EL10Ac8g20398 Beta vulgaris HOM05D000137 ORTHO05D000385 4.9e-10 68.2 106 37.7
EL10Ac9g22619 Beta vulgaris HOM05D004615 ORTHO05D000385 4.9e-10 68.2 106 37.7
EL10Ac2g03424 Beta vulgaris HOM05D004615 ORTHO05D000385 6.4e-10 67.8 113 38.9
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 6.4e-10 67.8 110 39.1
Hund23726 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.4e-10 67.8 105 41.0
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 1.1e-09 67.0 103 38.8
Hund23607 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.1e-09 67.0 101 40.6
EL10Ac7g17625 Beta vulgaris HOM05D004615 ORTHO05D000385 1.4e-09 66.6 106 36.8
EL10Ac3g06149 Beta vulgaris HOM05D004615 ORTHO05D000385 1.9e-09 66.2 113 38.1
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 1.9e-09 66.2 103 38.8
EL10Ac9g21235 Beta vulgaris HOM05D004615 ORTHO05D000385 1.9e-09 66.2 113 38.1
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 2.4e-09 65.9 71 50.7
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.2e-09 65.5 102 35.3
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.1e-09 65.1 105 39.0
Sopen07g011270 Solanum pennellii HOM05D000107 ORTHO05D000385 5.4e-09 64.7 63 55.6
Sc08g0005160 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.2e-08 63.5 102 38.2
AUR62042361 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.1e-08 62.8 103 35.9
AUR62034499 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.5e-08 62.0 112 37.5
Hund10264 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.0e-08 61.2 87 40.2
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.0e-07 60.5 110 36.4
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 1.7e-07 59.7 104 37.5
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-07 58.9 99 38.4
Solyc08g016677.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.0e-07 58.9 93 44.1
AUR62031856 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.9e-07 58.5 103 35.9
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 3.9e-07 58.5 101 36.6
EL10Ac3g06255 Beta vulgaris HOM05D004615 ORTHO05D000385 6.6e-07 57.8 129 33.3
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 6.6e-07 57.8 99 36.4
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-06 57.0 107 42.1
PGSC0003DMG400034515 Solanum tuberosum HOM05D008041 ORTHO05D000385 1.1e-06 57.0 48 58.3
PGSC0003DMG400042601 Solanum tuberosum HOM05D008041 ORTHO05D000385 1.1e-06 57.0 47 63.8
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.5e-06 56.6 84 39.3
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.9e-06 56.2 102 38.2
Atru.chr3.1415 Acer truncatum HOM05D005012 ORTHO05D005886 2.5e-06 55.8 102 34.3
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 2.5e-06 55.8 98 35.7
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.5e-06 55.8 105 34.3
Solyc11g045675.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.5e-06 55.8 29 89.7
CAN.G362.46 Capsicum annuum HOM05D002051 ORTHO05D002041 4.3e-06 55.1 46 58.7
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 4.3e-06 55.1 92 30.4
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-06 55.1 106 41.5
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 4.3e-06 55.1 103 33.0
Solyc11g042877.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 7.3e-06 54.3 46 58.7
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 7.3e-06 54.3 101 41.6
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 7.3e-06 54.3 104 42.3
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 9.5e-06 53.9 112 35.7


User provided reference genes

Program Settings