Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g015035.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.2e-106 389.0 206 100.0
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 6.5e-82 307.8 232 76.3
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.3e-79 300.1 226 74.8
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 5.1e-79 298.1 199 82.9
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 1.1e-78 297.0 199 81.4
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 2.4e-76 289.3 214 78.5
Sopen12g009350 Solanum pennellii HOM05D004926 ORTHO05D013907 2.2e-61 239.6 220 65.5
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 3.8e-58 228.8 189 69.3
PGSC0003DMG400017016 Solanum tuberosum HOM05D004926 ORTHO05D013907 6.7e-55 218.0 198 65.7
Solyc12g015923.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 1.6e-51 206.8 146 80.1
Solyc05g150114.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.4e-36 156.4 198 49.5
PGSC0003DMG400040719 Solanum tuberosum HOM05D004926 ORTHO05D013907 1.6e-35 153.7 120 71.7
Solyc05g045675.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 7.8e-27 124.8 199 43.7
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-21 105.5 216 35.2
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.0e-18 95.5 207 36.2
PGSC0003DMG400021467 Solanum tuberosum HOM05D004926 ORTHO05D013907 1.5e-17 94.0 111 51.4
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-16 89.7 233 33.0
Solyc11g150138.1 Solanum lycopersicum HOM05D000047 ORTHO05D013907 6.8e-15 85.1 49 91.8
Nitab4.5_0009292g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.9e-15 84.7 219 31.1
Solyc04g025125.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.0e-14 83.6 84 63.1
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-12 76.6 110 43.6
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-11 74.3 110 42.7
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.0e-11 72.0 107 42.1
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 6.0e-11 72.0 56 73.2
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-11 71.6 110 41.8
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-11 71.6 107 41.1
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-10 71.2 111 39.6
Nitab4.5_0000058g0340 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-10 70.5 101 41.6
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-10 70.1 107 41.1
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 107 41.1
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 134 37.3
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 107 41.1
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 8.6e-10 68.2 46 80.4
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 145 36.6
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 110 40.9
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 145 36.6
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 107 41.1
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-09 67.4 124 37.9
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-09 66.6 107 41.1
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-09 66.2 111 39.6
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.3e-09 65.9 99 40.4
Nitab4.5_0000030g0240 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.6e-09 65.5 107 40.2
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.3e-09 65.1 110 40.0
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.3e-09 65.1 107 41.1
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.3e-09 65.1 105 38.1
Nitab4.5_0001574g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-08 63.5 77 41.6
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-08 63.5 36 86.1
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-08 63.2 101 41.6
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-08 63.2 111 38.7
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-08 62.8 126 36.5
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-08 62.8 110 39.1
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-08 62.4 101 40.6
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.1e-08 61.6 110 36.4
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-07 61.2 102 39.2
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-07 60.1 133 35.3
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-07 59.7 110 39.1
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-07 59.7 110 39.1
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-06 57.0 103 38.8
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-06 55.8 145 31.7
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.5e-06 55.1 101 37.6


User provided reference genes

Program Settings