Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g014940.2 Solanum lycopersicum HOM05D000053 ORTHO05D026941 6.4e-161 570.9 320 100.0
Peaxi162Scf00349g00712 Petunia axillaris HOM05D000053 ORTHO05D000035 3.3e-24 116.7 190 42.6
Solyc01g014930.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.4e-21 106.7 186 43.0
Sopen01g003920 Solanum pennellii HOM05D000053 ORTHO05D000035 4.6e-18 96.3 162 38.9
Nitab4.5_0008247g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.3e-17 94.7 145 41.4
Solyc03g082780.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.3e-17 94.0 239 36.8
Solyc01g014160.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.8e-14 84.3 97 54.6
CAN.G575.9 Capsicum annuum HOM05D000053 ORTHO05D000035 1.5e-13 81.3 137 41.6
TWI38G0397 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 2.6e-13 80.5 182 34.6
CAN.G484.19 Capsicum annuum HOM05D000053 ORTHO05D000035 4.2e-11 73.2 191 37.2
CAN.G911.21 Capsicum annuum HOM05D000053 ORTHO05D000035 7.1e-11 72.4 56 64.3
PGSC0003DMG402021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.3e-11 72.0 202 34.7
CAN.G158.31 Capsicum annuum HOM05D009591 ORTHO05D000101 4.6e-10 69.7 60 65.0
Sopen01g001730 Solanum pennellii HOM05D000053 ORTHO05D000035 7.8e-10 68.9 233 31.3
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 1.0e-09 68.6 99 47.5
CAN.G158.29 Capsicum annuum HOM05D000053 ORTHO05D000001 2.3e-09 67.4 185 34.6
Duzib212G0733 Durio zibethinus HOM05D000053 ORTHO05D000448 6.6e-09 65.9 196 30.1
Peaxi162Scf00062g02014 Petunia axillaris HOM05D000053 ORTHO05D000035 1.5e-08 64.7 61 60.7
Solyc01g005730.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.5e-08 64.7 63 60.3
Nitab4.5_0027046g0020 Nicotiana tabacum HOM05D000053 ORTHO05D026941 1.9e-08 64.3 64 59.4
PGSC0003DMG400004284 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.3e-08 63.2 61 54.1
Peaxi162Scf00635g00019 Petunia axillaris HOM05D000053 ORTHO05D000035 9.6e-08 62.0 130 40.8
Duzib212G0346 Durio zibethinus HOM05D000053 ORTHO05D000035 1.3e-07 61.6 162 30.2
Solyc01g009930.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.8e-07 60.5 147 36.7
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 4.8e-07 59.7 61 52.5
Manes.06G042200 Manihot esculenta HOM05D000311 ORTHO05D000183 4.8e-07 59.7 142 34.5
TWI38G2367 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 4.8e-07 59.7 167 31.7
Lj5C206G2 Lonicera japonica HOM05D000053 ORTHO05D030004 6.2e-07 59.3 159 34.6
Peaxi162Scf00062g00217 Petunia axillaris HOM05D000053 ORTHO05D000035 1.1e-06 58.5 74 47.3
Solyc01g009690.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.4e-06 58.2 220 30.5
Duzib212G0726 Durio zibethinus HOM05D000053 ORTHO05D000448 1.8e-06 57.8 162 28.4
Prupe.6G281200 Prunus persica HOM05D000053 ORTHO05D000448 2.4e-06 57.4 135 33.3
TWI34G1516 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 2.4e-06 57.4 181 29.8
CAN.G1002.25 Capsicum annuum HOM05D000053 ORTHO05D000035 4.0e-06 56.6 145 33.8
Haze_24137 Corylus avellana HOM05D000053 ORTHO05D000448 4.0e-06 56.6 94 43.6
Eucgr.C04402 Eucalyptus grandis HOM05D000311 ORTHO05D000183 4.0e-06 56.6 178 30.9
FvH4_3g45420 Fragaria vesca HOM05D000071 ORTHO05D000029 4.0e-06 56.6 210 30.0
Solyc01g005870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.0e-06 56.6 129 38.8
PGSC0003DMG401002869 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.0e-06 56.6 196 28.1
arahy.Tifrunner.gnm1.ann1.TDL8AI Arachis hypogaea HOM05D000166 ORTHO05D000812 5.3e-06 56.2 189 28.0
CAN.G911.11 Capsicum annuum HOM05D000053 ORTHO05D000035 5.3e-06 56.2 240 28.8
RcHm_v2.0_Chr5g0042831 Rosa chinensis HOM05D000053 ORTHO05D000035 5.3e-06 56.2 164 31.7
Duzib268G1665 Durio zibethinus HOM05D000053 ORTHO05D000448 9.0e-06 55.5 161 31.1


User provided reference genes

Program Settings