Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g014170.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.4e-23 112.1 57 100.0
Solyc01g008410.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.0e-17 91.7 57 82.5
Solyc01g008390.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.2e-16 88.2 57 78.9
Sopen01g001720 Solanum pennellii HOM05D000053 ORTHO05D000035 2.9e-16 87.8 57 78.9
Solyc01g005760.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.8e-16 87.4 57 78.9
Sopen01g001750 Solanum pennellii HOM05D000053 ORTHO05D000035 3.8e-16 87.4 57 78.9
PGSC0003DMG401021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.5e-16 86.3 54 79.6
Solyc01g005720.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.4e-15 85.5 57 77.2
Solyc01g009700.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.4e-15 85.5 57 77.2
CAN.G608.6 Capsicum annuum HOM05D000053 ORTHO05D000035 2.5e-15 84.7 57 75.4
Sopen01g003910 Solanum pennellii HOM05D000053 ORTHO05D000035 2.5e-15 84.7 56 78.6
PGSC0003DMG400021051 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.5e-15 84.7 54 75.9
Sopen01g001870 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-15 84.3 57 75.4
Solyc01g005730.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.2e-15 84.0 57 73.7
Solyc01g005780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.2e-15 84.0 57 73.7
Sopen01g001770 Solanum pennellii HOM05D000053 ORTHO05D000035 4.2e-15 84.0 57 73.7
Sopen01g001730 Solanum pennellii HOM05D000053 ORTHO05D000035 5.5e-15 83.6 57 73.7
PGSC0003DMG400032130 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.5e-15 83.6 57 77.2
Solyc01g006550.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.2e-15 83.2 56 73.2
CAN.G1527.1 Capsicum annuum HOM05D000053 ORTHO05D000035 9.3e-15 82.8 57 75.4
CAN.G282.17 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-14 80.9 51 76.5
CAN.G911.22 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-14 80.9 51 78.4
CAN.G282.33 Capsicum annuum HOM05D000053 ORTHO05D000035 4.6e-14 80.5 57 73.7
Solyc01g009690.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.6e-14 80.5 57 71.9
Sopen01g002540 Solanum pennellii HOM05D000053 ORTHO05D000035 4.6e-14 80.5 55 70.9
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 6.1e-14 80.1 51 78.4
Solyc01g009930.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.1e-14 80.1 57 70.2
Sopen01g008240 Solanum pennellii HOM05D000053 ORTHO05D000035 6.1e-14 80.1 57 77.2
CAN.G282.34 Capsicum annuum HOM05D000053 ORTHO05D000035 7.9e-14 79.7 57 71.9
PGSC0003DMG400005226 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.9e-14 79.7 57 71.9
Nitab4.5_0014151g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.0e-13 79.3 57 73.7
CAN.G282.100 Capsicum annuum HOM05D000013 ORTHO05D000011 2.3e-13 78.2 55 70.9
Nitab4.5_0027046g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.9e-13 77.4 57 71.9
CAN.G257.92 Capsicum annuum HOM05D000053 ORTHO05D000035 6.7e-13 76.6 57 68.4
CAN.G282.27 Capsicum annuum HOM05D000053 ORTHO05D000035 6.7e-13 76.6 51 76.5
CAN.G282.38 Capsicum annuum HOM05D000053 ORTHO05D000035 1.5e-12 75.5 51 76.5
CAN.G911.15 Capsicum annuum HOM05D000053 ORTHO05D000035 1.5e-12 75.5 51 74.5
CAN.G911.24 Capsicum annuum HOM05D000053 ORTHO05D000035 2.5e-12 74.7 57 68.4
Nitab4.5_0009084g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.5e-12 74.7 57 70.2
Nitab4.5_0009034g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.3e-12 74.3 57 68.4
Solyc03g082780.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.3e-12 73.9 54 70.4
CAN.G282.37 Capsicum annuum HOM05D000053 ORTHO05D000035 5.7e-12 73.6 51 72.5
CAN.G282.30 Capsicum annuum HOM05D000053 ORTHO05D000035 1.7e-11 72.0 57 68.4
Solyc01g013870.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.8e-11 70.5 50 74.0
CAN.G143.39 Capsicum annuum HOM05D000053 ORTHO05D000035 2.4e-10 68.2 57 64.9
Nitab4.5_0001730g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.4e-10 68.2 57 61.4
CAN.G911.12 Capsicum annuum HOM05D000053 ORTHO05D000035 4.1e-10 67.4 57 63.2
Nitab4.5_0001730g0090 Nicotiana tabacum HOM05D000053 ORTHO05D000035 6.9e-10 66.6 53 64.2
CAN.G282.24 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-09 65.9 37 83.8
Nitab4.5_0002932g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.6e-09 64.7 55 61.8
PGSC0003DMG400011610 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.0e-08 60.5 60 53.3
CAN.G520.28 Capsicum annuum HOM05D000053 ORTHO05D000035 6.5e-08 60.1 45 64.4
PGSC0003DMG400031446 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.5e-08 59.7 51 54.9
Nitab4.5_0007678g0050 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.1e-07 59.3 56 62.5
Sopen12g023650 Solanum pennellii HOM05D000053 ORTHO05D000035 1.1e-07 59.3 51 58.8
Peaxi162Scf00062g00217 Petunia axillaris HOM05D000053 ORTHO05D000035 1.9e-07 58.5 53 49.1
PGSC0003DMG400023869 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.5e-07 58.2 54 59.3
Sopen03g006290 Solanum pennellii HOM05D000053 ORTHO05D000035 3.2e-07 57.8 36 75.0
PGSC0003DMG400014720 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-07 57.8 52 59.6
PGSC0003DMG400039627 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.2e-07 57.8 51 52.9
CAN.G911.16 Capsicum annuum HOM05D000053 ORTHO05D000035 4.2e-07 57.4 56 55.4
Solyc12g049190.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.2e-07 57.4 51 56.9
Solyc12g100030.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.2e-07 57.4 54 59.3
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-07 57.4 54 57.4
PGSC0003DMG400031448 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-07 57.4 50 54.0
PGSC0003DMG402025507 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.2e-07 57.4 51 52.9
PGSC0003DMG400011611 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.5e-07 57.0 51 56.9
PGSC0003DMG400014718 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.5e-07 57.0 51 51.0
PGSC0003DMG400031451 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.5e-07 57.0 51 51.0
CAN.G575.7 Capsicum annuum HOM05D000053 ORTHO05D000035 7.2e-07 56.6 47 57.4
Solyc12g006020.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.2e-07 56.6 55 50.9
Sopen00g010090 Solanum pennellii HOM05D000053 ORTHO05D000035 7.2e-07 56.6 44 63.6
Sopen12g001990 Solanum pennellii HOM05D000053 ORTHO05D000035 7.2e-07 56.6 55 50.9
PGSC0003DMG400026231 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.2e-07 56.6 52 51.9
Peaxi162Scf00306g00043 Petunia axillaris HOM05D000053 ORTHO05D000035 9.4e-07 56.2 53 49.1
PGSC0003DMG400023867 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.4e-07 56.2 52 53.8
PGSC0003DMG400036994 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.4e-07 56.2 52 55.8
CAN.G575.115 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-06 55.8 45 60.0
PGSC0003DMG400023863 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.2e-06 55.8 52 53.8
PGSC0003DMG400040927 Solanum tuberosum HOM05D000152 ORTHO05D000035 1.2e-06 55.8 51 51.0
CAN.G575.74 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-06 55.5 50 52.0
Solyc06g008300.4 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.6e-06 55.5 51 49.0
Sopen06g003150 Solanum pennellii HOM05D000053 ORTHO05D000035 1.6e-06 55.5 51 49.0
CAN.G143.40 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-06 55.1 30 86.7
CAN.G575.10 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-06 55.1 53 50.9
CAN.G793.60 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-06 55.1 48 54.2
Peaxi162Scf00062g02014 Petunia axillaris HOM05D000053 ORTHO05D000035 2.1e-06 55.1 54 50.0
PGSC0003DMG400013898 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-06 55.1 55 52.7
PGSC0003DMG401002869 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-06 55.1 54 55.6
PGSC0003DMG402004726 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.1e-06 55.1 55 54.5
CAN.G282.29 Capsicum annuum HOM05D000053 ORTHO05D000035 2.7e-06 54.7 30 86.7
CAN.G564.15 Capsicum annuum HOM05D000053 ORTHO05D000035 2.7e-06 54.7 53 49.1
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 2.7e-06 54.7 55 49.1
CAN.G1579.21 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-06 54.3 52 50.0
CAN.G2075.4 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-06 54.3 52 50.0
CAN.G575.133 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-06 54.3 56 51.8
PGSC0003DMG400015824 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.6e-06 54.3 52 48.1
PGSC0003DMG400017966 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.6e-06 54.3 50 52.0
PGSC0003DMG400038990 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.6e-06 54.3 52 57.7
Peaxi162Scf00635g00020 Petunia axillaris HOM05D000053 ORTHO05D000035 4.7e-06 53.9 51 51.0
Solyc12g099870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.7e-06 53.9 53 47.2
PGSC0003DMG400004722 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.7e-06 53.9 50 52.0
CAN.G575.83 Capsicum annuum HOM05D000053 ORTHO05D000035 6.1e-06 53.5 52 48.1
PGR083G2395 Punica granatum HOM05D000053 ORTHO05D000035 6.1e-06 53.5 51 54.9
Solyc12g099950.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.1e-06 53.5 50 52.0
Sopen12g034500 Solanum pennellii HOM05D000053 ORTHO05D000035 6.1e-06 53.5 53 47.2
PGSC0003DMG400024404 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.1e-06 53.5 52 55.8
CAN.G575.123 Capsicum annuum HOM05D000053 ORTHO05D000035 7.9e-06 53.1 51 49.0
Solyc08g067797.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.9e-06 53.1 52 55.8
PGSC0003DMG400014719 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.9e-06 53.1 51 49.0
PGSC0003DMG402023866 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.9e-06 53.1 52 53.8


User provided reference genes

Program Settings