Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.0e-43 176.4 83 100.0
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 2.0e-26 122.1 82 67.1
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 9.4e-24 113.2 88 61.4
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-23 110.5 74 68.9
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.7e-21 103.2 82 56.1
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 3.5e-18 94.7 82 53.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.7e-17 92.4 82 51.2
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.0e-17 90.9 53 75.5
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 3.2e-16 88.2 74 59.5
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-16 87.8 52 73.1
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 9.4e-16 86.7 50 72.0
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-15 86.3 52 69.2
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-15 86.3 52 71.2
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-15 85.5 59 72.9
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 1.4e-14 82.8 83 45.8
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-14 82.8 83 47.0
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-14 82.4 83 45.8
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.8e-14 82.4 83 45.8
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.3e-14 82.0 83 48.2
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 2.3e-14 82.0 50 70.0
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-14 81.6 83 45.8
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 3.0e-14 81.6 83 45.8
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 3.0e-14 81.6 83 45.8
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 6.8e-14 80.5 83 44.6
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-13 79.0 79 48.1
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-13 78.6 52 67.3
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 3.4e-13 78.2 83 44.6
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-13 77.8 76 48.7
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.7e-13 77.4 79 46.8
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-12 76.3 66 51.5
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.7e-12 75.9 84 47.6
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-12 75.5 77 46.8
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-12 75.5 79 46.8
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-12 74.7 73 49.3
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 1.8e-11 72.4 70 45.7
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.4e-11 72.0 82 50.0
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 3.1e-11 71.6 85 45.9
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 4.1e-11 71.2 73 49.3
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-10 69.7 56 53.6
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-10 69.3 56 53.6
Peaxi162Scf00602g00110 Petunia axillaris HOM05D003888 ORTHO05D007163 2.0e-10 68.9 54 63.0
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 2.7e-10 68.6 66 47.0
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 3.5e-10 68.2 73 46.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.5e-10 68.2 65 55.4
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-10 68.2 67 47.8
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.5e-10 67.8 82 48.8
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 4.5e-10 67.8 51 56.9
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-10 67.8 56 53.6
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 5.9e-10 67.4 46 63.0
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-10 67.4 51 56.9
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-10 67.0 66 47.0
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 7.7e-10 67.0 61 54.1
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-10 67.0 51 54.9
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 1.0e-09 66.6 54 53.7
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-09 65.5 76 39.5
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.8e-09 64.7 55 50.9
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 6.5e-09 63.9 46 60.9
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.5e-09 63.5 87 39.1
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.1e-08 63.2 58 53.4
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-08 63.2 37 73.0
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-08 62.8 38 65.8
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-08 62.4 53 49.1
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-08 62.0 37 70.3
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-08 62.0 65 44.6
Peaxi162Scf00962g00310 Petunia axillaris HOM05D008541 ORTHO05D010458 4.2e-08 61.2 40 67.5
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-08 60.8 63 42.9
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.6e-07 59.3 56 51.8
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.6e-07 58.2 61 45.9
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.0e-07 57.0 56 44.6
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.0e-06 56.6 70 42.9
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-06 56.2 45 51.1
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 2.3e-06 55.5 69 43.5
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 5.2e-06 54.3 85 37.6
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 5.2e-06 54.3 55 47.3


User provided reference genes

Program Settings