Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g013880.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.4e-44 181.4 93 100.0
Solyc01g005720.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.6e-15 84.0 75 58.7
CAN.G282.37 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-14 83.2 100 48.0
PGSC0003DMG400016357 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.6e-14 83.2 45 86.7
CAN.G911.22 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-14 82.0 100 49.0
CAN.G282.29 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-14 80.9 80 52.5
Sopen01g008230 Solanum pennellii HOM05D000053 ORTHO05D000035 2.4e-13 79.3 45 86.7
CAN.G282.19 Capsicum annuum HOM05D000053 ORTHO05D000035 3.1e-13 79.0 134 40.3
CAN.G911.15 Capsicum annuum HOM05D000053 ORTHO05D000035 4.0e-13 78.6 100 49.0
Sopen01g001720 Solanum pennellii HOM05D000053 ORTHO05D000035 4.0e-13 78.6 102 49.0
CAN.G282.33 Capsicum annuum HOM05D000053 ORTHO05D000035 5.3e-13 78.2 99 47.5
Solyc01g005870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 5.3e-13 78.2 99 46.5
Sopen01g003920 Solanum pennellii HOM05D000053 ORTHO05D000035 5.3e-13 78.2 125 39.2
CAN.G282.100 Capsicum annuum HOM05D000013 ORTHO05D000011 6.9e-13 77.8 98 49.0
CAN.G911.24 Capsicum annuum HOM05D000053 ORTHO05D000035 6.9e-13 77.8 94 54.3
CAN.G257.93 Capsicum annuum HOM05D000053 ORTHO05D000035 9.0e-13 77.4 74 58.1
Solyc01g005760.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.2e-12 77.0 99 45.5
Solyc03g082780.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.2e-12 77.0 45 82.2
Solyc01g014300.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.5e-12 76.6 45 80.0
Solyc01g008390.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.0e-12 76.3 101 45.5
CAN.G257.40 Capsicum annuum HOM05D000053 ORTHO05D000035 2.6e-12 75.9 99 45.5
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 2.6e-12 75.9 48 83.3
CAN.G911.16 Capsicum annuum HOM05D000053 ORTHO05D000035 3.4e-12 75.5 100 47.0
Sopen01g001870 Solanum pennellii HOM05D000053 ORTHO05D000035 3.4e-12 75.5 99 46.5
CAN.G282.20 Capsicum annuum HOM05D000053 ORTHO05D000035 4.4e-12 75.1 48 79.2
CAN.G282.25 Capsicum annuum HOM05D000053 ORTHO05D000035 4.4e-12 75.1 94 50.0
CAN.G282.27 Capsicum annuum HOM05D000053 ORTHO05D000035 4.4e-12 75.1 98 48.0
PGSC0003DMG401021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.4e-12 75.1 99 46.5
CAN.G282.24 Capsicum annuum HOM05D000053 ORTHO05D000035 7.6e-12 74.3 97 51.5
CAN.G282.30 Capsicum annuum HOM05D000053 ORTHO05D000035 9.9e-12 73.9 66 59.1
Solyc01g008410.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.9e-12 73.9 125 38.4
PGSC0003DMG402021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.9e-12 73.9 99 45.5
CAN.G282.31 Capsicum annuum HOM05D000053 ORTHO05D000035 1.7e-11 73.2 53 73.6
CAN.G608.4 Capsicum annuum HOM05D000053 ORTHO05D000035 2.2e-11 72.8 45 75.6
CAN.G257.92 Capsicum annuum HOM05D000053 ORTHO05D000035 2.9e-11 72.4 100 48.0
Sopen01g002540 Solanum pennellii HOM05D000053 ORTHO05D000035 3.8e-11 72.0 189 31.2
CAN.G143.39 Capsicum annuum HOM05D000053 ORTHO05D000035 6.4e-11 71.2 48 70.8
CAN.G143.40 Capsicum annuum HOM05D000053 ORTHO05D000035 6.4e-11 71.2 45 75.6
Solyc01g005780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.4e-11 71.2 99 43.4
CAN.G911.21 Capsicum annuum HOM05D000053 ORTHO05D000035 2.4e-10 69.3 45 75.6
CAN.G608.5 Capsicum annuum HOM05D000053 ORTHO05D000035 4.2e-10 68.6 42 76.2
Sopen01g001750 Solanum pennellii HOM05D000053 ORTHO05D000035 7.1e-10 67.8 45 73.3
Sopen01g001770 Solanum pennellii HOM05D000053 ORTHO05D000035 7.1e-10 67.8 48 66.7
Nitab4.5_0014151g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 9.3e-10 67.4 94 42.6
CAN.G911.18 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-09 67.0 43 69.8
PGSC0003DMG400005226 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.6e-09 66.6 98 44.9
Nitab4.5_0002932g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.1e-09 66.2 105 43.8
Solyc01g014310.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.1e-09 66.2 43 76.7
CAN.G257.91 Capsicum annuum HOM05D000053 ORTHO05D000035 2.7e-09 65.9 44 72.7
Solyc01g009690.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.7e-09 65.9 47 66.0
Nitab4.5_0002932g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.5e-09 65.5 96 41.7
Solyc01g006550.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.5e-09 65.5 100 43.0
Solyc01g009930.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.5e-09 65.5 100 43.0
PGSC0003DMG400032130 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.0e-09 64.7 83 44.6
Nitab4.5_0001730g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 7.8e-09 64.3 70 45.7
Nitab4.5_0009034g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 7.8e-09 64.3 47 63.8
CAN.G158.29 Capsicum annuum HOM05D000053 ORTHO05D000001 1.3e-08 63.5 120 36.7
Nitab4.5_0002757g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.3e-08 63.5 99 42.4
Nitab4.5_0009084g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.3e-08 63.5 47 61.7
Nitab4.5_0027046g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.3e-08 63.5 47 61.7
GSVIVG01037155001 Vitis vinifera HOM05D000053 ORTHO05D000035 1.3e-08 63.5 92 39.1
PGSC0003DMG400021051 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.7e-08 63.2 45 68.9
Nitab4.5_0006164g0060 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.3e-08 62.8 118 32.2
CAN.G608.6 Capsicum annuum HOM05D000053 ORTHO05D000035 3.0e-08 62.4 79 50.6
Solyc01g005730.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.0e-08 62.4 96 40.6
CAN.G282.21 Capsicum annuum HOM05D000053 ORTHO05D000035 3.9e-08 62.0 45 71.1
Nitab4.5_0003583g0040 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.9e-08 62.0 104 35.6
CAN.G158.33 Capsicum annuum HOM05D000053 ORTHO05D000035 5.1e-08 61.6 47 66.0
CAN.G911.14 Capsicum annuum HOM05D000053 ORTHO05D000035 8.7e-08 60.8 102 43.1
Sopen01g001730 Solanum pennellii HOM05D000053 ORTHO05D000035 8.7e-08 60.8 47 61.7
CAN.G941.13 Capsicum annuum HOM05D000053 ORTHO05D000035 1.1e-07 60.5 74 40.5
Nitab4.5_0008760g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.1e-07 60.5 97 40.2
Nitab4.5_0009084g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.1e-07 60.5 100 40.0
Sopen12g034500 Solanum pennellii HOM05D000053 ORTHO05D000035 1.1e-07 60.5 60 46.7
Peaxi162Scf00086g00054 Petunia axillaris HOM05D000053 ORTHO05D000035 1.5e-07 60.1 99 35.4
Sopen01g003910 Solanum pennellii HOM05D000053 ORTHO05D000035 1.5e-07 60.1 75 45.3
PGSC0003DMG400004725 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.5e-07 60.1 95 37.9
PGSC0003DMG400031283 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.9e-07 59.7 58 51.7
Solyc12g099870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.5e-07 59.3 60 46.7
CAN.G484.20 Capsicum annuum HOM05D000053 ORTHO05D000035 3.3e-07 58.9 92 39.1
PGSC0003DMG400031284 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.3e-07 58.9 89 41.6
CAN.G484.15 Capsicum annuum HOM05D000053 ORTHO05D000035 4.3e-07 58.5 92 38.0
Migut.J00128 Erythranthe guttata HOM05D000053 ORTHO05D000448 4.3e-07 58.5 99 36.4
CAN.G564.14 Capsicum annuum HOM05D000053 ORTHO05D000035 5.6e-07 58.2 92 34.8
CAN.G575.125 Capsicum annuum HOM05D000053 ORTHO05D000035 5.6e-07 58.2 96 36.5
CAN.G575.83 Capsicum annuum HOM05D000053 ORTHO05D000035 5.6e-07 58.2 46 56.5
Peaxi162Scf00062g00928 Petunia axillaris HOM05D000053 ORTHO05D000035 5.6e-07 58.2 46 56.5
CAN.G2177.3 Capsicum annuum HOM05D000053 ORTHO05D000035 7.3e-07 57.8 100 41.0
Nitab4.5_0006164g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000058 7.3e-07 57.8 56 50.0
CAN.G1002.25 Capsicum annuum HOM05D000053 ORTHO05D000035 9.6e-07 57.4 100 39.0
CAN.G941.12 Capsicum annuum HOM05D000053 ORTHO05D000035 9.6e-07 57.4 45 57.8
CAN.G143.41 Capsicum annuum HOM05D000053 ORTHO05D000035 1.3e-06 57.0 44 65.9
PGSC0003DMG400038990 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.3e-06 57.0 122 32.0
CAN.G21.7 Capsicum annuum HOM05D000053 ORTHO05D000035 1.6e-06 56.6 44 56.8
PSO017G5033 Papaver somniferum HOM05D000053 ORTHO05D000035 1.6e-06 56.6 50 56.0
Solyc01g014160.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.6e-06 56.6 70 50.0
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.6e-06 56.6 98 34.7
CAN.G575.85 Capsicum annuum HOM05D000053 ORTHO05D000035 2.8e-06 55.8 101 38.6
CAN.G793.59 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-06 55.5 125 32.0
Solyc12g049200.1 Solanum lycopersicum HOM05D000053 ORTHO05D000058 3.6e-06 55.5 76 38.2
Thecc.07G121900 Theobroma cacao HOM05D000053 ORTHO05D000035 3.6e-06 55.5 47 53.2
CAN.G575.127 Capsicum annuum HOM05D000053 ORTHO05D000035 4.8e-06 55.1 99 38.4
Nn2g10927 Nelumbo nucifera HOM05D000053 ORTHO05D000448 4.8e-06 55.1 50 48.0
PGSC0003DMG400004722 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.8e-06 55.1 60 43.3
PGSC0003DMG400011611 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.8e-06 55.1 100 36.0
PGSC0003DMG400039627 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.8e-06 55.1 47 48.9
CAN.G1579.25 Capsicum annuum HOM05D000053 ORTHO05D000035 6.2e-06 54.7 94 38.3
CAN.G575.9 Capsicum annuum HOM05D000053 ORTHO05D000035 6.2e-06 54.7 50 46.0
SalBow5G3751 Salvia bowleyana HOM05D000053 ORTHO05D000448 6.2e-06 54.7 100 36.0
Solyc06g008300.4 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.2e-06 54.7 118 30.5
Sopen06g003150 Solanum pennellii HOM05D000053 ORTHO05D000035 6.2e-06 54.7 118 30.5
Thecc.07G121500 Theobroma cacao HOM05D000053 ORTHO05D000035 6.2e-06 54.7 96 36.5
TAR633G0804 Trochodendron aralioides HOM05D000053 ORTHO05D000448 6.2e-06 54.7 65 41.5
CAN.G1484.12 Capsicum annuum HOM05D002496 ORTHO05D002787 8.1e-06 54.3 100 39.0
CAN.G2075.3 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-06 54.3 94 38.3
CAN.G575.10 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-06 54.3 50 46.0
CAN.G575.68 Capsicum annuum HOM05D000053 ORTHO05D000035 8.1e-06 54.3 46 52.2


User provided reference genes

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