Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g013870.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.3e-35 152.5 79 100.0
Solyc01g008390.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.9e-18 95.5 65 80.0
PGSC0003DMG400005226 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.5e-18 95.1 65 75.4
PGSC0003DMG401021049 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.5e-18 95.1 65 76.9
Solyc01g009930.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.3e-18 94.7 65 73.8
PGSC0003DMG400021051 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.3e-18 94.7 67 76.1
PGSC0003DMG400032130 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.3e-17 92.8 65 75.4
Solyc01g005780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.1e-17 92.0 64 71.9
Sopen01g001770 Solanum pennellii HOM05D000053 ORTHO05D000035 2.1e-17 92.0 64 71.9
CAN.G282.17 Capsicum annuum HOM05D000053 ORTHO05D000035 2.8e-17 91.7 65 67.7
CAN.G608.6 Capsicum annuum HOM05D000053 ORTHO05D000035 4.8e-17 90.9 65 69.2
CAN.G911.15 Capsicum annuum HOM05D000053 ORTHO05D000035 6.2e-17 90.5 65 72.3
Solyc01g008410.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.2e-17 90.5 67 76.1
Nitab4.5_0009084g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 8.1e-17 90.1 65 75.4
Sopen01g003910 Solanum pennellii HOM05D000053 ORTHO05D000035 8.1e-17 90.1 65 78.5
Solyc01g005730.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.8e-16 89.0 67 71.6
Sopen01g001720 Solanum pennellii HOM05D000053 ORTHO05D000035 1.8e-16 89.0 67 73.1
CAN.G282.38 Capsicum annuum HOM05D000053 ORTHO05D000035 2.4e-16 88.6 65 73.8
Nitab4.5_0014151g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.4e-16 88.6 65 73.8
Solyc01g005760.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.4e-16 88.6 66 74.2
CAN.G1527.1 Capsicum annuum HOM05D000053 ORTHO05D000035 3.1e-16 88.2 65 73.8
Solyc01g006550.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.1e-16 88.2 67 71.6
Sopen01g001730 Solanum pennellii HOM05D000053 ORTHO05D000035 3.1e-16 88.2 67 71.6
CAN.G282.27 Capsicum annuum HOM05D000053 ORTHO05D000035 6.9e-16 87.0 65 67.7
Nitab4.5_0027046g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 6.9e-16 87.0 66 68.2
Sopen01g001870 Solanum pennellii HOM05D000053 ORTHO05D000035 6.9e-16 87.0 68 70.6
Sopen01g002540 Solanum pennellii HOM05D000053 ORTHO05D000035 6.9e-16 87.0 67 70.1
CAN.G911.22 Capsicum annuum HOM05D000053 ORTHO05D000035 9.0e-16 86.7 65 70.8
Sopen01g001750 Solanum pennellii HOM05D000053 ORTHO05D000035 1.2e-15 86.3 68 70.6
Nitab4.5_0009034g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.5e-15 85.9 65 67.7
Solyc01g005720.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.0e-15 85.5 68 70.6
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 2.6e-15 85.1 61 72.1
CAN.G257.92 Capsicum annuum HOM05D000053 ORTHO05D000035 4.5e-15 84.3 69 66.7
CAN.G282.33 Capsicum annuum HOM05D000053 ORTHO05D000035 5.8e-15 84.0 65 66.2
CAN.G282.37 Capsicum annuum HOM05D000053 ORTHO05D000035 5.8e-15 84.0 65 64.6
Solyc01g009700.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.6e-15 83.6 66 69.7
Nitab4.5_0001730g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 9.9e-15 83.2 65 66.2
Solyc01g009690.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.3e-14 82.8 67 68.7
Sopen01g008240 Solanum pennellii HOM05D000053 ORTHO05D000035 1.7e-14 82.4 66 71.2
Nitab4.5_0002932g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.9e-14 81.6 65 66.2
Solyc01g014020.1 Solanum lycopersicum HOM05D046712 ORTHO05D000035 3.8e-14 81.3 82 59.8
CAN.G143.39 Capsicum annuum HOM05D000053 ORTHO05D000035 3.2e-13 78.2 65 67.7
CAN.G911.12 Capsicum annuum HOM05D000053 ORTHO05D000035 3.2e-13 78.2 65 69.2
CAN.G282.30 Capsicum annuum HOM05D000053 ORTHO05D000035 5.4e-13 77.4 65 61.5
CAN.G282.100 Capsicum annuum HOM05D000013 ORTHO05D000011 9.3e-13 76.6 71 62.0
CAN.G282.34 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-12 76.3 69 62.3
Nitab4.5_0001730g0090 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.7e-12 75.1 65 63.1
CAN.G911.24 Capsicum annuum HOM05D000053 ORTHO05D000035 1.0e-11 73.2 65 58.5
CAN.G911.16 Capsicum annuum HOM05D000053 ORTHO05D000035 1.3e-11 72.8 64 65.6
Solyc03g082780.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.8e-11 72.4 70 60.0
Solyc01g014170.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.3e-11 72.0 50 74.0
CAN.G158.30 Capsicum annuum HOM05D000053 ORTHO05D000035 3.0e-11 71.6 44 81.8
CAN.G282.24 Capsicum annuum HOM05D000053 ORTHO05D000035 5.1e-11 70.9 52 73.1
PGSC0003DMG400036994 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.1e-11 70.9 60 58.3
Nitab4.5_0007678g0050 Nicotiana tabacum HOM05D000053 ORTHO05D000035 6.7e-11 70.5 65 63.1
Sopen03g006300 Solanum pennellii HOM05D000053 ORTHO05D000035 1.6e-09 65.9 65 52.3
CAN.G520.28 Capsicum annuum HOM05D000053 ORTHO05D000035 4.8e-09 64.3 57 59.6
Sopen03g006290 Solanum pennellii HOM05D000053 ORTHO05D000035 4.8e-09 64.3 47 63.8
PGSC0003DMG400023869 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.4e-08 62.8 60 55.0
PGSC0003DMG400013898 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.4e-08 62.0 59 54.2
PGSC0003DMG400023864 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.4e-08 62.0 57 54.4
CAN.G143.40 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-07 59.7 36 75.0
CAN.G2157.2 Capsicum annuum HOM05D000053 ORTHO05D000035 1.5e-07 59.3 59 54.2
PGSC0003DMG400026231 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.5e-07 59.3 61 49.2
CAN.G484.18 Capsicum annuum HOM05D000053 ORTHO05D000035 2.6e-07 58.5 64 59.4
Peaxi162Scf00062g00217 Petunia axillaris HOM05D000053 ORTHO05D000035 2.6e-07 58.5 63 50.8
Peaxi162Scf00062g00928 Petunia axillaris HOM05D000053 ORTHO05D000035 2.6e-07 58.5 63 52.4
Peaxi162Scf00306g00043 Petunia axillaris HOM05D000053 ORTHO05D000035 2.6e-07 58.5 65 49.2
Solyc06g008270.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.6e-07 58.5 57 52.6
Solyc12g006020.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 5.8e-07 57.4 59 47.5
Sopen12g001990 Solanum pennellii HOM05D000053 ORTHO05D000035 7.6e-07 57.0 59 47.5
PGSC0003DMG400015824 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.9e-07 56.6 55 50.9
PGSC0003DMG400031283 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.9e-07 56.6 34 70.6
PGSC0003DMG400031446 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.9e-07 56.6 59 52.5
PGSC0003DMG400016357 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.3e-06 56.2 47 68.1
Nitab4.5_0006164g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000058 1.7e-06 55.8 59 49.2
PGSC0003DMG400040927 Solanum tuberosum HOM05D000152 ORTHO05D000035 1.7e-06 55.8 59 49.2
CAN.G282.21 Capsicum annuum HOM05D000053 ORTHO05D000035 2.2e-06 55.5 39 74.4
CAN.G484.15 Capsicum annuum HOM05D000053 ORTHO05D000035 2.2e-06 55.5 64 54.7
CAN.G575.74 Capsicum annuum HOM05D000053 ORTHO05D000035 2.2e-06 55.5 56 51.8
PGSC0003DMG400005541 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.2e-06 55.5 58 50.0
PGSC0003DMG401002869 Solanum tuberosum HOM05D000053 ORTHO05D000035 2.2e-06 55.5 55 50.9
Solyc12g100030.2 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.9e-06 55.1 55 52.7
Sopen00g010090 Solanum pennellii HOM05D000053 ORTHO05D000035 2.9e-06 55.1 55 52.7
Sopen06g003130 Solanum pennellii HOM05D000053 ORTHO05D000035 3.8e-06 54.7 57 49.1
PGSC0003DMG400014720 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.8e-06 54.7 59 50.8
PGSC0003DMG400031284 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.8e-06 54.7 34 70.6
CAN.G575.124 Capsicum annuum HOM05D000053 ORTHO05D000058 4.9e-06 54.3 56 50.0
Peaxi162Scf00635g00020 Petunia axillaris HOM05D000053 ORTHO05D000035 4.9e-06 54.3 64 50.0
Sopen12g023650 Solanum pennellii HOM05D000053 ORTHO05D000035 4.9e-06 54.3 57 50.9
PGSC0003DMG400017969 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.9e-06 54.3 63 49.2
PGSC0003DMG400038990 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.9e-06 54.3 57 50.9
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 6.4e-06 53.9 65 46.2
Peaxi162Scf00635g00019 Petunia axillaris HOM05D000053 ORTHO05D000035 6.4e-06 53.9 66 48.5
PGSC0003DMG400004727 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.4e-06 53.9 55 49.1
PGSC0003DMG400011610 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.4e-06 53.9 59 49.2
CAN.G282.29 Capsicum annuum HOM05D000053 ORTHO05D000035 8.4e-06 53.5 39 69.2
CAN.G575.7 Capsicum annuum HOM05D000053 ORTHO05D000035 8.4e-06 53.5 63 46.0
PGSC0003DMG400023863 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.4e-06 53.5 55 50.9
PGSC0003DMG400031448 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.4e-06 53.5 59 49.2
PGSC0003DMG400037551 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.4e-06 53.5 60 48.3
PGSC0003DMG400039627 Solanum tuberosum HOM05D000053 ORTHO05D000035 8.4e-06 53.5 59 49.2


User provided reference genes

Program Settings