Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 2.4e-72 275.4 142 100.0
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 1.1e-67 260.0 142 97.2
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 4.3e-61 238.0 140 89.3
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.4e-35 152.5 152 59.9
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 3.5e-26 122.1 148 55.4
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 9.1e-19 97.4 140 47.1
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.5e-18 95.5 88 58.0
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 6.5e-17 91.3 101 53.5
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.1e-16 90.5 136 47.1
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 1.4e-14 83.6 141 44.7
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 8.9e-14 80.9 73 60.3
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 8.9e-14 80.9 73 60.3
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.5e-13 80.1 141 44.0
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 4.1e-11 72.0 73 54.8
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 1.2e-10 70.5 103 43.7
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 2.0e-10 69.7 131 40.5
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.7e-10 69.3 131 41.2
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.7e-10 69.3 131 41.2
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 5.9e-10 68.2 138 37.7
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.0e-09 67.4 74 50.0
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 1.3e-09 67.0 124 41.9
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 1.3e-09 67.0 74 48.6
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 1.7e-09 66.6 89 50.6
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 2.3e-09 66.2 124 38.7
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.9e-09 65.9 91 48.4
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 2.9e-09 65.9 65 52.3
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 3.8e-09 65.5 81 42.0
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 5.0e-09 65.1 75 52.0
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 5.0e-09 65.1 77 48.1
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.0e-09 65.1 100 48.0
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.0e-09 65.1 124 38.7
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.0e-09 65.1 73 47.9
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 8.6e-09 64.3 88 48.9
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.1e-08 63.9 139 35.3
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 1.5e-08 63.5 77 50.6
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 1.9e-08 63.2 83 47.0
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.9e-08 63.2 71 45.1
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 2.5e-08 62.8 66 51.5
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 2.5e-08 62.8 65 53.8
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 2.5e-08 62.8 95 44.2
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 2.5e-08 62.8 77 50.6
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.3e-08 62.4 122 36.9
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 4.3e-08 62.0 129 39.5
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 4.3e-08 62.0 82 43.9
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 5.6e-08 61.6 71 49.3
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 5.6e-08 61.6 73 47.9
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 5.6e-08 61.6 130 39.2
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 7.3e-08 61.2 93 43.0
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 7.3e-08 61.2 91 46.2
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 7.3e-08 61.2 75 45.3
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.2e-07 60.5 93 41.9
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.2e-07 60.5 84 47.6
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.2e-07 60.5 119 35.3
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.6e-07 60.1 113 39.8
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 2.1e-07 59.7 71 47.9
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 2.1e-07 59.7 78 46.2
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.1e-07 59.7 104 36.5
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.1e-07 59.7 104 36.5
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.1e-07 59.7 110 38.2
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 2.8e-07 59.3 72 50.0
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 3.6e-07 58.9 92 43.5
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 4.7e-07 58.5 100 40.0
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.7e-07 58.5 119 38.7
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 6.1e-07 58.2 114 36.8
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 6.1e-07 58.2 127 35.4
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 6.1e-07 58.2 114 37.7
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 8.0e-07 57.8 116 42.2
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 8.0e-07 57.8 68 48.5
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 8.0e-07 57.8 79 39.2
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 8.0e-07 57.8 88 44.3
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 8.0e-07 57.8 87 44.8
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.0e-06 57.4 109 39.4
Eucgr.C00437 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.4e-06 57.0 75 46.7
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.4e-06 57.0 144 36.8
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 1.8e-06 56.6 131 38.2
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.8e-06 56.6 115 40.0
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 1.8e-06 56.6 123 34.1
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 2.3e-06 56.2 85 42.4
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 2.3e-06 56.2 63 49.2
SGA_v2.0_scaffold64G21997 Striga asiatica HOM05D003969 ORTHO05D003125 4.0e-06 55.5 49 53.1
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 4.0e-06 55.5 97 35.1
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 5.2e-06 55.1 98 37.8
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 5.2e-06 55.1 116 37.1
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.2e-06 55.1 120 35.0
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 6.8e-06 54.7 132 37.1
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 6.8e-06 54.7 132 37.1
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.8e-06 54.7 108 38.0
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 6.8e-06 54.7 123 35.0
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 8.9e-06 54.3 96 38.5
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 8.9e-06 54.3 89 43.8
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 8.9e-06 54.3 149 33.6
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 8.9e-06 54.3 137 34.3


User provided reference genes

Program Settings