Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g010185.1 Solanum lycopersicum HOM05D010760 ORTHO05D014669 2.2e-100 369.0 191 100.0
Sopen01g005800 Solanum pennellii HOM05D010760 ORTHO05D014669 8.7e-41 171.0 97 91.8
Solyc01g010215.1 Solanum lycopersicum HOM05D010760 ORTHO05D014669 2.4e-38 162.9 200 50.5
PGSC0003DMG400021884 Solanum tuberosum HOM05D010760 ORTHO05D014669 5.5e-35 151.8 191 49.7
Sopen01g005810 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-34 150.6 148 58.1
Nitab4.5_0000509g0050 Nicotiana tabacum HOM05D010760 ORTHO05D014669 2.0e-32 143.3 188 49.5
Nitab4.5_0001118g0110 Nicotiana tabacum HOM05D010760 ORTHO05D014669 6.5e-28 128.3 123 57.7
PGSC0003DMG400021883 Solanum tuberosum HOM05D010760 ORTHO05D014669 2.2e-23 113.2 156 46.2
Peaxi162Scf00026g00083 Petunia axillaris HOM05D010760 ORTHO05D014669 3.7e-23 112.5 144 42.4
Nitab4.5_0000509g0070 Nicotiana tabacum HOM05D010760 ORTHO05D014669 1.4e-22 110.5 120 49.2
PGSC0003DMG400021886 Solanum tuberosum HOM05D010760 ORTHO05D014669 1.2e-21 107.5 128 47.7
Sopen01g005790 Solanum pennellii HOM05D010760 ORTHO05D014669 2.6e-21 106.3 102 56.9
Solyc01g010220.3 Solanum lycopersicum HOM05D010760 ORTHO05D014669 1.9e-19 100.1 150 43.3
Sopen01g005820 Solanum pennellii HOM05D010760 ORTHO05D014669 8.0e-18 94.7 135 40.7
Peaxi162Scf00026g00913 Petunia axillaris HOM05D010760 ORTHO05D014669 4.0e-17 92.4 142 40.8
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.1e-14 84.3 90 47.8
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 3.1e-14 82.8 85 48.2
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 7.0e-14 81.6 105 42.9
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 3.5e-13 79.3 90 43.3
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 3.5e-13 79.3 116 39.7
Nitab4.5_0000523g0100 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.7e-12 77.0 79 53.2
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.7e-12 77.0 90 43.3
Nitab4.5_0003766g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.9e-12 76.3 118 40.7
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 5.0e-12 75.5 108 40.7
Nitab4.5_0000498g0210 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.1e-11 74.3 110 39.1
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 1.5e-11 73.9 102 39.2
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 2.5e-11 73.2 139 36.7
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 9.4e-11 71.2 82 42.7
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.6e-10 70.5 110 38.2
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.8e-09 67.0 77 44.2
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 63.2 111 31.5
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 63.2 111 31.5
PGSC0003DMG400021882 Solanum tuberosum HOM05D042358 ORTHO05D037689 3.4e-08 62.8 172 32.6
Solyc02g061920.2 Solanum lycopersicum HOM05D002833 ORTHO05D003210 4.4e-08 62.4 110 30.0
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 9.8e-08 61.2 90 37.8
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 1.3e-07 60.8 90 32.2
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 1.7e-07 60.5 64 48.4
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 2.2e-07 60.1 119 32.8
AUR62023882 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.2e-07 60.1 131 31.3
AUR62024857 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.2e-07 60.1 105 32.4
Nitab4.5_0000061g0370 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.2e-07 60.1 93 36.6
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-07 60.1 104 33.7
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 2.2e-07 60.1 110 29.1
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 2.2e-07 60.1 110 29.1
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.1 110 29.1
Psat6g037960 Pisum sativum HOM05D008404 ORTHO05D000001 3.7e-07 59.3 100 38.0
THA.LOC109116961 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 3.7e-07 59.3 96 34.4
Ah.14g080650 Amaranthus hybridus HOM05D002833 ORTHO05D003210 4.8e-07 58.9 108 29.6
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 4.8e-07 58.9 117 28.2
Nitab4.5_0007140g0030 Nicotiana tabacum HOM05D010760 ORTHO05D000001 8.3e-07 58.2 55 45.5
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-06 57.8 95 31.6
Sopen02g005450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.0 90 32.2
THA.LOC109116033 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 2.4e-06 56.6 96 33.3
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 3.1e-06 56.2 90 38.9
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.1e-06 55.8 95 34.7
Lalb_Chr13g0290791 Lupinus albus HOM05D002833 ORTHO05D003210 4.1e-06 55.8 81 37.0
Sp4g03150 Schrenkiella parvula HOM05D002833 ORTHO05D003210 4.1e-06 55.8 126 32.5
THA.LOC104810177 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 4.1e-06 55.8 87 36.8
AUR62033479 Chenopodium quinoa HOM05D002833 ORTHO05D003210 5.4e-06 55.5 90 32.2
Lalb_Chr09g0335481 Lupinus albus HOM05D002833 ORTHO05D003210 5.4e-06 55.5 105 30.5
AUR62024333 Chenopodium quinoa HOM05D002833 ORTHO05D003210 7.0e-06 55.1 100 30.0
ECA233G3435 Erigeron canadensis HOM05D002833 ORTHO05D003210 7.0e-06 55.1 95 35.8
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 7.0e-06 55.1 90 32.2
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-06 54.7 135 32.6
AUR62021616 Chenopodium quinoa HOM05D021338 ORTHO05D003210 9.1e-06 54.7 86 33.7
AUR62037648 Chenopodium quinoa HOM05D002833 ORTHO05D003210 9.1e-06 54.7 105 29.5
ECA240G2389 Erigeron canadensis HOM05D000002 ORTHO05D003210 9.1e-06 54.7 93 35.5
Sopen10g012450 Solanum pennellii HOM05D000006 ORTHO05D000001 9.1e-06 54.7 126 30.2


User provided reference genes

Program Settings