Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g010140.1 Solanum lycopersicum HOM05D003025 ORTHO05D051140 5.8e-278 960.3 495 100.0
Sopen01g005700 Solanum pennellii HOM05D003025 ORTHO05D051140 9.3e-244 846.7 502 89.4
Peaxi162Scf00026g00314 Petunia axillaris HOM05D003025 ORTHO05D003305 8.0e-70 268.9 613 37.7
Nitab4.5_0001196g0010 Nicotiana tabacum HOM05D003025 ORTHO05D003305 2.3e-64 250.8 627 36.5
Nitab4.5_0003339g0090 Nicotiana tabacum HOM05D003025 ORTHO05D003305 1.4e-50 204.9 580 33.6
Nitab4.5_0009153g0010 Nicotiana tabacum HOM05D003025 ORTHO05D003305 2.6e-44 184.1 615 31.2
Peaxi162Scf00188g01025 Petunia axillaris HOM05D003025 ORTHO05D003305 1.1e-34 152.1 598 29.3
Nitab4.5_0002491g0030 Nicotiana tabacum HOM05D003025 ORTHO05D003305 7.1e-34 149.4 570 29.8
Sopen05g006590 Solanum pennellii HOM05D003025 ORTHO05D003305 3.0e-32 144.1 595 27.4
Sopen04g001270 Solanum pennellii HOM05D003025 ORTHO05D003305 1.9e-31 141.4 575 28.2
PGSC0003DMG400001936 Solanum tuberosum HOM05D003025 ORTHO05D003305 8.9e-29 132.5 574 26.8
Nitab4.5_0001071g0040 Nicotiana tabacum HOM05D003025 ORTHO05D003305 9.9e-28 129.0 570 27.7
Solyc04g005290.3 Solanum lycopersicum HOM05D003025 ORTHO05D003305 6.4e-27 126.3 577 27.2
PGSC0003DMG400025716 Solanum tuberosum HOM05D003025 ORTHO05D003305 5.4e-26 123.2 610 25.7
Dinv34020 Davidia involucrata HOM05D003025 ORTHO05D003305 5.6e-15 86.7 479 25.5
Solyc05g011830.4 Solanum lycopersicum HOM05D003025 ORTHO05D003305 5.6e-15 86.7 333 27.6
Lj6A773T133 Lonicera japonica HOM05D003025 ORTHO05D003305 2.8e-14 84.3 547 23.9
CSS0010260 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 1.4e-13 82.0 520 24.8
Dinv15582 Davidia involucrata HOM05D003025 ORTHO05D003305 1.5e-12 78.6 473 24.1
CsaV3_5G033470 Cucumis sativus L. HOM05D003025 ORTHO05D003305 8.4e-11 72.8 436 26.6
PGR102G2660 Punica granatum HOM05D003025 ORTHO05D003305 4.2e-10 70.5 468 24.4
vmacro01298 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 4.2e-10 70.5 384 26.8
Hma1.2p1_0428F.1_g150820 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 5.4e-10 70.1 515 24.3
HanXRQChr12g0365071 Helianthus annuus HOM05D003025 ORTHO05D003305 7.1e-10 69.7 400 26.5
GSVIVG01010102001 Vitis vinifera HOM05D003025 ORTHO05D003305 7.1e-10 69.7 501 25.1
Actinidia19904 Actinidia chinensis HOM05D003025 ORTHO05D003305 2.7e-09 67.8 382 24.3
PGSC0003DMG400025718 Solanum tuberosum HOM05D003025 ORTHO05D003305 2.7e-09 67.8 281 29.2
CiPaw.05G121600 Carya illinoinensis HOM05D003025 ORTHO05D003305 3.5e-09 67.4 513 25.3
Cc11_g11550 Coffea canephora HOM05D003025 ORTHO05D003305 4.6e-09 67.0 596 24.2
Rhsim12G0071300 Rhododendron simsii HOM05D003025 ORTHO05D003305 1.0e-08 65.9 459 25.5
TAR622G0187 Trochodendron aralioides HOM05D003025 ORTHO05D003305 2.3e-08 64.7 511 24.1
PSO017G6048 Papaver somniferum HOM05D003025 ORTHO05D003305 1.5e-07 62.0 360 25.8
Sed0017206 Sechium edule HOM05D003025 ORTHO05D003305 1.5e-07 62.0 468 24.6
Actinidia31928 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.9e-07 61.6 370 26.5
Lj3A1027T87 Lonicera japonica HOM05D003025 ORTHO05D003305 2.5e-07 61.2 444 23.2
Nn4g23540 Nelumbo nucifera HOM05D003025 ORTHO05D003305 2.8e-06 57.8 510 22.7
CANSAT64G2528 Cannabis sativa HOM05D003025 ORTHO05D003305 3.7e-06 57.4 159 30.8
Sabra08G0084400 Salix brachista HOM05D003025 ORTHO05D003305 8.1e-06 56.2 114 36.8


User provided reference genes

Program Settings