Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.8e-173 612.5 305 100.0
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 7.7e-148 527.3 280 93.2
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.5e-140 501.5 268 90.7
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.1e-138 496.9 280 87.1
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 9.4e-138 493.8 268 89.6
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 4.4e-127 458.4 280 77.5
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.6e-124 449.9 267 79.4
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.3e-123 446.8 268 77.2
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 2.2e-123 446.0 268 79.5
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.9e-123 445.7 268 78.4
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 2.9e-123 445.7 268 78.4
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 6.5e-123 444.5 280 74.6
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 8.5e-123 444.1 268 76.9
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.1e-122 443.7 273 76.6
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.1e-122 443.7 268 78.4
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.5e-122 442.6 268 77.2
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 4.2e-122 441.8 266 78.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 5.5e-122 441.4 268 78.7
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 7.2e-122 441.0 268 76.5
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 9.5e-122 440.7 285 74.4
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.1e-121 439.5 280 76.1
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.1e-121 439.5 280 75.4
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 6.1e-121 438.0 268 77.6
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.3e-120 436.0 269 75.5
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 4.0e-120 435.3 276 75.4
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 6.8e-120 434.5 268 75.7
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 6.8e-120 434.5 265 78.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.2e-119 433.7 280 72.5
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 2.6e-119 432.6 266 76.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 3.4e-119 432.2 274 74.8
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.4e-119 432.2 268 75.0
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 3.4e-119 432.2 268 75.0
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.7e-119 431.4 298 69.8
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 9.8e-119 430.6 268 75.0
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.3e-118 430.3 280 72.9
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 2.2e-118 429.5 280 72.5
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.2e-118 429.5 268 75.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.8e-118 429.1 301 69.1
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.8e-118 429.1 280 71.8
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.9e-118 428.3 298 69.1
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 4.9e-118 428.3 280 71.4
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 4.9e-118 428.3 292 71.6
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 6.3e-118 427.9 268 73.5
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 8.3e-118 427.6 268 75.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.4e-117 426.8 269 74.0
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.4e-117 426.8 269 74.0
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.4e-117 426.0 280 73.2
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 3.1e-117 425.6 282 72.0
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 3.1e-117 425.6 280 72.5
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 3.1e-117 425.6 268 73.9
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 4.1e-117 425.2 280 72.1
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 4.1e-117 425.2 278 72.3
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.0e-116 422.9 268 74.3
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.7e-116 422.5 268 73.9
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 3.5e-116 422.2 268 73.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 3.5e-116 422.2 274 73.0
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 5.9e-116 421.4 280 70.7
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 5.9e-116 421.4 280 71.1
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 7.7e-116 421.0 268 74.3
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.9e-115 419.1 250 80.0
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.9e-115 419.1 268 72.8
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 3.8e-115 418.7 319 67.4
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 4.3e-114 415.2 292 68.8
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 5.6e-114 414.8 312 66.7
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 9.5e-114 414.1 319 65.8
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.2e-113 413.7 297 68.0
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 8.0e-113 411.0 268 70.9
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 6.8e-112 407.9 268 70.9
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.3e-110 403.7 250 76.4
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 6.4e-110 401.4 268 70.1
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 5.0e-107 391.7 268 67.2
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.0e-104 384.0 265 66.4
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.1e-104 382.5 246 73.2
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 3.4e-103 379.0 268 65.7
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 9.2e-101 370.9 225 76.4
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.3e-99 366.3 274 63.9
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 3.1e-96 355.9 358 52.8
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 9.2e-93 344.4 268 65.3
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.9e-90 336.7 266 62.8
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 2.1e-89 333.2 268 62.7
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 9.2e-85 317.8 192 77.6
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.3e-59 234.2 156 72.4
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 4.9e-54 215.7 159 67.9
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 3.1e-48 196.4 142 70.4
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 8.8e-35 151.8 254 32.7
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.3e-34 149.8 92 77.2
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.5e-13 81.3 206 29.1
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.0e-10 70.9 267 25.8
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 2.8e-09 67.0 42 76.2
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.2e-07 61.6 168 26.8
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 8.6e-06 55.5 36 72.2


User provided reference genes

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