Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.4e-147 526.2 241 100.0
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 7.4e-146 520.4 245 98.4
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 9.1e-136 486.9 246 93.1
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 5.0e-126 454.5 277 78.3
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.9e-117 426.0 238 81.9
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.0e-110 403.7 239 79.9
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 3.3e-109 398.7 246 77.6
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.3e-89 333.6 227 67.4
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.7e-89 333.2 230 66.5
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 3.7e-89 332.0 226 67.7
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.4e-88 330.1 237 66.2
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.4e-88 330.1 230 64.8
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 4.1e-88 328.6 225 65.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.7e-86 323.2 226 66.4
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.7e-86 323.2 228 63.2
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.1e-85 320.5 228 65.8
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.5e-85 319.3 231 64.5
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.5e-85 319.3 231 64.5
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 7.3e-85 317.8 228 65.4
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 2.8e-84 315.8 229 62.9
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 6.2e-84 314.7 229 62.9
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 1.1e-83 313.9 229 62.0
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.4e-83 313.5 230 60.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.8e-83 313.2 229 62.9
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 2.6e-82 309.3 230 59.6
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.4e-82 308.9 230 61.7
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 9.9e-82 307.4 230 60.4
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.3e-81 307.0 258 58.1
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.2e-81 306.2 229 59.8
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 2.9e-81 305.8 232 62.5
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 3.7e-81 305.4 232 62.5
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 6.4e-81 304.7 221 61.5
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 8.4e-81 304.3 222 63.5
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.1e-80 303.9 229 62.9
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.4e-80 302.8 236 59.3
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 9.2e-80 300.8 235 59.1
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 7.8e-79 297.7 228 62.7
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 3.0e-78 295.8 220 60.5
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 3.9e-78 295.4 222 59.9
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 3.9e-78 295.4 235 58.3
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 3.9e-78 295.4 228 62.3
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 1.1e-77 293.9 229 62.0
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.5e-77 293.5 206 65.0
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.5e-77 292.7 222 64.0
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 3.3e-77 292.4 232 57.8
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.6e-76 290.0 230 58.3
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 2.1e-76 289.7 227 59.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 2.8e-76 289.3 222 59.9
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 3.6e-76 288.9 195 65.1
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.1e-75 287.3 226 58.0
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.4e-75 287.0 236 55.5
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.4e-75 287.0 258 53.5
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 2.4e-75 286.2 229 56.8
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.4e-75 286.2 236 55.9
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.1e-75 285.8 222 60.4
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.0e-75 285.4 222 59.9
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 4.0e-75 285.4 216 59.3
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.6e-74 282.7 214 61.2
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.6e-74 282.7 234 56.8
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.4e-74 282.0 195 64.1
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 4.4e-74 282.0 223 59.6
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 5.8e-74 281.6 235 57.9
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 7.6e-74 281.2 246 55.3
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 9.9e-74 280.8 238 55.5
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.3e-73 280.4 192 66.7
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 1.7e-73 280.0 225 59.1
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 2.9e-73 279.3 236 54.7
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.4e-72 276.2 221 58.4
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.4e-72 276.2 189 65.6
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.2e-72 275.8 224 58.9
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 4.2e-72 275.4 202 60.4
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 9.3e-72 274.2 222 59.5
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 9.3e-72 274.2 231 56.7
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 6.0e-71 271.6 237 54.9
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.0e-70 270.8 220 57.7
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.0e-70 270.8 220 57.7
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.7e-70 270.0 262 53.4
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 3.0e-70 269.2 222 58.6
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 5.1e-70 268.5 234 55.6
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 8.7e-70 267.7 222 59.0
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 8.7e-70 267.7 223 59.2
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.5e-69 266.9 238 55.9
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.5e-69 266.9 233 53.6
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 4.3e-69 265.4 223 57.4
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 7.3e-69 264.6 200 62.5
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.6e-68 263.5 235 54.9
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 2.8e-68 262.7 215 58.6
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.8e-68 262.7 190 64.2
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 3.6e-68 262.3 215 59.1
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 6.2e-68 261.5 162 70.4
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.1e-68 261.2 162 70.4
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.1e-68 261.2 162 70.4
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.4e-67 260.4 162 70.4
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 2.4e-67 259.6 186 64.5
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.4e-67 259.6 186 63.4
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 3.1e-67 259.2 200 58.0
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 4.0e-67 258.8 227 55.1
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 5.4e-64 248.4 220 55.5
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 3.5e-63 245.7 164 67.7
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 3.5e-63 245.7 164 67.7
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 5.1e-62 241.9 220 54.1
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 8.7e-62 241.1 196 59.7
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 8.7e-62 241.1 196 59.7
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 8.7e-62 241.1 207 55.6
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 2.8e-60 236.1 175 61.7
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.1e-59 234.2 220 53.6
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.0e-58 229.9 123 78.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.0e-58 229.9 161 64.6
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 9.9e-58 227.6 159 65.4
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.1e-53 214.2 111 79.3
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 6.9e-51 204.9 159 57.2
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.0e-49 201.1 120 66.7
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 4.8e-44 182.2 217 47.0
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.3e-38 163.3 121 59.5
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 6.5e-33 145.2 119 52.1
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 4.2e-32 142.5 81 71.6
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 7.2e-32 141.7 84 65.5
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.6e-31 140.6 119 52.1
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 5.7e-29 132.1 124 46.8
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.1e-19 99.8 162 41.4
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 4.7e-07 59.3 96 37.5


User provided reference genes

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