Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g008280.4 Solanum lycopersicum HOM05D004580 ORTHO05D005917 1.9e-223 778.9 386 100.0
Sopen01g003800 Solanum pennellii HOM05D004580 ORTHO05D005917 4.9e-216 754.2 381 97.9
PGSC0003DMG402016396 Solanum tuberosum HOM05D004580 ORTHO05D005917 3.4e-209 731.5 379 94.2
Nitab4.5_0000069g0120 Nicotiana tabacum HOM05D004580 ORTHO05D005917 6.9e-194 680.6 378 86.5
Nitab4.5_0013217g0010 Nicotiana tabacum HOM05D004580 ORTHO05D005917 1.3e-192 676.4 378 86.2
Oeu036766.1 Olea europaea HOM05D004580 ORTHO05D005917 4.6e-166 588.2 358 79.1
MSTRG.2066 Avicennia marina HOM05D004580 ORTHO05D005917 9.7e-164 580.5 357 77.9
Peaxi162Scf00021g02317 Petunia axillaris HOM05D004580 ORTHO05D005917 4.2e-159 565.1 354 79.1
Hma1.2p1_0044F.1_g026170 Hydrangea macrophylla HOM05D004580 ORTHO05D005917 5.5e-159 564.7 391 70.8
MSTRG.13678 Avicennia marina HOM05D004580 ORTHO05D005917 6.1e-158 561.2 357 75.4
COL.COLO4_12032 Corchorus olitorius HOM05D004580 ORTHO05D005917 8.8e-157 557.4 364 72.8
SGA_v2.0_scaffold358G49840 Striga asiatica HOM05D004580 ORTHO05D005917 3.3e-156 555.4 361 73.4
DCAR_023183 Daucus carota HOM05D004580 ORTHO05D005917 4.4e-156 555.1 361 74.5
DCAR_002598 Daucus carota HOM05D004580 ORTHO05D005917 9.7e-156 553.9 361 72.9
Lsat_1_v5_gn_4_64561 Lactuca sativa HOM05D004580 ORTHO05D005917 1.7e-155 553.1 380 72.1
Duzib093G0091 Durio zibethinus HOM05D004580 ORTHO05D005917 4.8e-155 551.6 387 68.7
Manes.18G065933 Manihot esculenta HOM05D004580 ORTHO05D005917 4.8e-155 551.6 387 68.5
Gorai.010G039500 Gossypium raimondii HOM05D004580 ORTHO05D005917 1.8e-154 549.7 366 71.9
Ciclev10001487m.g Citrus clementina HOM05D004580 ORTHO05D005917 5.3e-154 548.1 362 71.3
Dinv17643 Davidia involucrata HOM05D004580 ORTHO05D005917 6.9e-154 547.7 341 76.5
Gohir.A06G034900 Gossypium hirsutum HOM05D004580 ORTHO05D005917 6.9e-154 547.7 366 71.6
Gohir.D06G035500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 2.6e-153 545.8 366 71.6
Duzib041G0230 Durio zibethinus HOM05D004580 ORTHO05D005917 2.9e-152 542.3 364 70.6
VMungo1127G0933 Vigna mungo HOM05D004580 ORTHO05D005917 5.0e-152 541.6 359 73.3
ECA236G1081 Erigeron canadensis HOM05D004580 ORTHO05D005917 1.1e-151 540.4 363 71.9
CiPaw.07G178200 Carya illinoinensis HOM05D004580 ORTHO05D005917 1.9e-151 539.7 362 70.4
Migut.E00684 Erythranthe guttata HOM05D004580 ORTHO05D005917 1.9e-151 539.7 354 73.2
AT4G08960 Arabidopsis thaliana HOM05D004580 ORTHO05D005917 4.2e-151 538.5 364 69.0
Cfa013658 Carpinus fangiana HOM05D004580 ORTHO05D005917 5.5e-151 538.1 363 71.3
Atru.chr13.1137 Acer truncatum HOM05D004580 ORTHO05D005917 9.4e-151 537.3 357 71.1
HanXRQChr04g0124871 Helianthus annuus HOM05D004580 ORTHO05D005917 1.2e-150 537.0 361 71.5
PGR031G1028 Punica granatum HOM05D004580 ORTHO05D005917 2.1e-150 536.2 364 70.1
Eucgr.B00032 Eucalyptus grandis HOM05D004580 ORTHO05D005917 2.7e-150 535.8 365 70.1
QL12p037342 Quercus lobata HOM05D004580 ORTHO05D005917 3.6e-150 535.4 359 71.3
Carub.0006s2756 Capsella rubella HOM05D004580 ORTHO05D005917 4.7e-150 535.0 363 69.4
Thecc.08G104300 Theobroma cacao HOM05D004580 ORTHO05D005917 4.7e-150 535.0 368 70.4
Phvul.011G102600 Phaseolus vulgaris HOM05D004580 ORTHO05D005917 6.1e-150 534.6 361 71.7
Sed0021368 Sechium edule HOM05D004580 ORTHO05D005917 1.0e-149 533.9 359 69.9
Nn5g30036 Nelumbo nucifera HOM05D004580 ORTHO05D005917 3.0e-149 532.3 358 71.2
Haze_22292 Corylus avellana HOM05D004580 ORTHO05D005917 3.9e-149 531.9 361 70.6
CsaV3_2G029780 Cucumis sativus L. HOM05D004580 ORTHO05D005917 3.9e-149 531.9 390 66.4
vmacro15988 Vaccinium macrocarpon HOM05D004580 ORTHO05D005917 3.9e-149 531.9 360 70.8
Aa31LG9G14650 Aethionema arabicum HOM05D004580 ORTHO05D005917 5.2e-149 531.6 362 68.8
C09p37760 Brassica napus HOM05D004580 ORTHO05D005917 6.7e-149 531.2 385 65.7
BolC9t56609H Brassica oleracea HOM05D004580 ORTHO05D005917 6.7e-149 531.2 385 65.7
MELO3C011036.2 Cucumis melo HOM05D004580 ORTHO05D005917 8.8e-149 530.8 365 69.6
Potri.005G162900 Populus trichocarpa HOM05D004580 ORTHO05D005917 1.5e-148 530.0 364 69.5
AL6G41550 Arabidopsis lyrata HOM05D004580 ORTHO05D005917 3.3e-148 528.9 363 68.0
Sabra05G0123100 Salix brachista HOM05D004580 ORTHO05D005917 4.4e-148 528.5 361 69.8
ClCG08G011200 Citrullus lanatus HOM05D004580 ORTHO05D005917 7.4e-148 527.7 362 70.2
Actinidia04333 Actinidia chinensis HOM05D004580 ORTHO05D005917 9.7e-148 527.3 359 70.5
CARHR259970 Cardamine hirsuta HOM05D004580 ORTHO05D005917 9.7e-148 527.3 363 68.3
arahy.Tifrunner.gnm1.ann1.UE4JHM Arachis hypogaea HOM05D004580 ORTHO05D005917 1.3e-147 526.9 340 73.8
TAR625G1360 Trochodendron aralioides HOM05D004580 ORTHO05D005917 1.7e-147 526.6 340 73.2
BcaC01g04745 Brassica carinata HOM05D004580 ORTHO05D005917 3.7e-147 525.4 385 65.2
TWI12G1022 Tripterygium wilfordii HOM05D004580 ORTHO05D005917 3.7e-147 525.4 363 69.7
Sp6g08660 Schrenkiella parvula HOM05D004580 ORTHO05D005917 4.8e-147 525.0 358 69.0
THA.LOC104813113 Tarenaya hassleriana HOM05D004580 ORTHO05D005917 4.8e-147 525.0 363 69.7
Potri.002G099000 Populus trichocarpa HOM05D004580 ORTHO05D005917 8.2e-147 524.2 389 65.8
BraA03t12037Z Brassica rapa HOM05D004580 ORTHO05D005917 1.1e-146 523.9 383 66.1
Glyma.11G184601 Glycine max HOM05D004580 ORTHO05D005917 1.1e-146 523.9 347 72.9
A03p28330 Brassica napus HOM05D004580 ORTHO05D005917 2.4e-146 522.7 383 65.5
BcaB01g02835 Brassica carinata HOM05D004580 ORTHO05D005917 3.1e-146 522.3 385 65.7
arahy.Tifrunner.gnm1.ann1.T3Z839 Arachis hypogaea HOM05D004580 ORTHO05D005917 4.1e-146 521.9 348 72.7
BcaB01g02381 Brassica carinata HOM05D004580 ORTHO05D005917 4.1e-146 521.9 364 68.4
Nn5g30292 Nelumbo nucifera HOM05D004580 ORTHO05D005917 5.3e-146 521.5 339 72.9
Sc10g0006870 Simmondsia chinensis HOM05D004580 ORTHO05D005917 9.1e-146 520.8 399 65.4
C03p34240 Brassica napus HOM05D004580 ORTHO05D005917 1.2e-145 520.4 383 65.3
BolC3t15733H Brassica oleracea HOM05D004580 ORTHO05D005917 1.2e-145 520.4 383 65.3
BcaB01g02823 Brassica carinata HOM05D004580 ORTHO05D005917 1.6e-145 520.0 385 65.5
CANSAT25G2089 Cannabis sativa HOM05D004580 ORTHO05D005917 3.5e-145 518.8 359 68.8
Cpa.g.sc36.160 Carica papaya HOM05D004580 ORTHO05D005917 7.7e-145 517.7 362 68.5
Thhalv10028722m.g Eutrema salsugineum HOM05D004580 ORTHO05D005917 3.8e-144 515.4 389 63.8
RcHm_v2.0_Chr7g0243401 Rosa chinensis HOM05D004580 ORTHO05D005917 5.0e-144 515.0 356 69.9
Prupe.1G521000 Prunus persica HOM05D004580 ORTHO05D005917 8.5e-144 514.2 392 64.5
Hund08631 Selenicereus undatus HOM05D004580 ORTHO05D005917 1.1e-143 513.8 372 66.4
RcHm_v2.0_Chr1g0321971 Rosa chinensis HOM05D004580 ORTHO05D005917 1.5e-143 513.5 361 68.7
PSO541G6503 Papaver somniferum HOM05D004580 ORTHO05D005917 5.5e-143 511.5 360 67.2
MD15G1419400 Malus domestica HOM05D004580 ORTHO05D005917 9.4e-143 510.8 362 66.6
FvH4_6g23990 Fragaria vesca HOM05D004580 ORTHO05D005917 4.7e-142 508.4 360 66.7
FAN14G1039 Fragaria x ananassa HOM05D004580 ORTHO05D005917 4.7e-142 508.4 360 66.7
BcaC04g20934 Brassica carinata HOM05D004580 ORTHO05D005917 1.8e-141 506.5 385 64.2
PSO781G0322 Papaver somniferum HOM05D004580 ORTHO05D005917 5.2e-141 505.0 357 65.5
Aqoxy7G04111 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 1.5e-140 503.4 338 69.8
MD08G1227100 Malus domestica HOM05D004580 ORTHO05D005917 2.6e-140 502.7 349 68.2
CSS0036827 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 5.7e-140 501.5 386 66.6
CSS0039091 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 9.7e-140 500.7 360 68.1
Sabra02G0077800 Salix brachista HOM05D004580 ORTHO05D005917 9.7e-140 500.7 357 68.6
Ah.01g012710 Amaranthus hybridus HOM05D004580 ORTHO05D005917 2.8e-139 499.2 361 66.2
FAN05G1019 Fragaria x ananassa HOM05D004580 ORTHO05D005917 4.8e-139 498.4 345 67.2
Lj3P847T35 Lonicera japonica HOM05D004580 ORTHO05D005917 4.8e-139 498.4 306 76.8
AUR62017729 Chenopodium quinoa HOM05D004580 ORTHO05D005917 6.3e-139 498.0 365 66.8
Psat7g188520 Pisum sativum HOM05D004580 ORTHO05D005917 7.0e-138 494.6 364 67.0
CsaV3_3G047600 Cucumis sativus L. HOM05D004580 ORTHO05D005917 2.0e-137 493.0 356 67.4
TAR381G0740 Trochodendron aralioides HOM05D004580 ORTHO05D005917 2.0e-137 493.0 340 68.8
ClCG11G014220 Citrullus lanatus HOM05D004580 ORTHO05D005917 2.7e-137 492.7 348 67.2
MELO3C003564.2 Cucumis melo HOM05D004580 ORTHO05D005917 3.5e-137 492.3 355 67.6
ATR0706G027 Amborella trichopoda HOM05D004580 ORTHO05D005917 4.5e-137 491.9 335 70.1
CSS0011251 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 1.0e-136 490.7 309 75.4
Sed0008659 Sechium edule HOM05D004580 ORTHO05D005917 1.7e-136 490.0 322 69.6
Rhsim09G0069400 Rhododendron simsii HOM05D004580 ORTHO05D005917 2.2e-136 489.6 366 65.8
Medtr4g053370 Medicago truncatula HOM05D004580 ORTHO05D005917 2.9e-136 489.2 340 68.8
Lj3g0026440 Lotus japonicus HOM05D004580 ORTHO05D005917 3.8e-136 488.8 340 70.0
MBI05_g34722_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 3.8e-136 488.8 391 61.6
Ca_19393_v3 Cicer arietinum L. HOM05D004580 ORTHO05D005917 6.5e-136 488.0 361 65.9
PSO541G6453 Papaver somniferum HOM05D004580 ORTHO05D005917 8.5e-136 487.6 358 64.2
Lalb_Chr03g0028011 Lupinus albus HOM05D004580 ORTHO05D005917 1.1e-135 487.3 362 65.7
Nn1g05417 Nelumbo nucifera HOM05D004580 ORTHO05D005917 3.2e-135 485.7 333 70.0
EL10Ac9g22979 Beta vulgaris HOM05D004580 ORTHO05D005917 1.7e-131 473.4 345 66.1
GSVIVG01009068001 Vitis vinifera HOM05D004580 ORTHO05D005917 2.2e-131 473.0 340 67.1
CDE05G3003 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 3.1e-130 469.2 364 63.7
SEGI_24357 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 3.5e-129 465.7 357 64.1
FvH4_5g29380 Fragaria vesca HOM05D004580 ORTHO05D005917 5.2e-125 451.8 353 64.0
HPP92_004278 Vanilla planifolia HOM05D004580 ORTHO05D005917 6.8e-125 451.4 367 62.4
Os06g0219800 Oryza sativa ssp. japonica HOM05D004580 ORTHO05D005917 1.6e-121 440.3 367 59.7
MBI02_g02175_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 2.7e-121 439.5 343 62.7
Zm00001eb372770 Zea mays HOM05D004580 ORTHO05D005917 1.0e-120 437.6 368 59.5
AagrBONN_evm.TU.Sc2ySwM_117.2526 Anthoceros agrestis HOM05D004580 ORTHO05D005917 6.6e-120 434.9 338 62.7
Mapoly0004s0171 Marchantia polymorpha HOM05D004580 ORTHO05D005917 6.1e-118 428.3 361 58.4
SHI33348 Sapria himalayana HOM05D004580 ORTHO05D005917 1.5e-116 423.7 359 57.1
Gorai.009G235200 Gossypium raimondii HOM05D004580 ORTHO05D005917 1.4e-114 417.2 320 61.6
Pp3c1_41950 Physcomitrium patens HOM05D004580 ORTHO05D005917 3.5e-113 412.5 348 59.5
Pp3c2_670 Physcomitrium patens HOM05D004580 ORTHO05D005917 3.5e-113 412.5 299 64.5
HPP92_016361 Vanilla planifolia HOM05D004580 ORTHO05D005917 7.3e-111 404.8 332 60.2
SMO329G0013 Selaginella moellendorffii HOM05D004580 ORTHO05D005917 2.8e-110 402.9 326 59.2
FAN18G2046 Fragaria x ananassa HOM05D004580 ORTHO05D005917 5.8e-108 395.2 281 66.5
Gohir.D05G227500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 4.9e-107 392.1 236 74.6
CBR_g45439 Chara braunii HOM05D004580 ORTHO05D005917 5.6e-103 378.6 346 54.9
Gohir.A05G224950 Gossypium hirsutum HOM05D004580 ORTHO05D005917 1.4e-101 374.0 304 60.2
TPR.G17228 Trifolium pratense HOM05D004580 ORTHO05D005917 8.9e-101 371.3 316 58.2
Lalb_Chr19g0136591 Lupinus albus HOM05D004580 ORTHO05D005917 1.5e-100 370.5 363 54.0
Glyma.12G087751 Glycine max HOM05D004580 ORTHO05D005917 3.4e-100 369.4 206 85.0
unitig_8.g3592 Utricularia gibba HOM05D004580 ORTHO05D005917 6.6e-96 355.1 196 83.2
FAN02G1810 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.3e-95 352.8 196 80.6
CAN.G282.45 Capsicum annuum HOM05D004580 ORTHO05D005917 3.9e-88 329.3 229 72.9
BraA09t38542Z Brassica rapa HOM05D004580 ORTHO05D005917 8.4e-83 311.6 219 67.1
A09p29790 Brassica napus HOM05D004580 ORTHO05D005917 1.2e-81 307.8 177 79.1
SEGI_19435 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 1.3e-78 297.7 269 56.1
Cre13.g580650 Chlamydomonas reinhardtii HOM05D004580 ORTHO05D005917 6.4e-75 285.4 401 40.1
Aqoxy6G00748 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 4.2e-74 282.7 232 61.2
Oeu013193.1 Olea europaea HOM05D004580 ORTHO05D005917 7.1e-74 282.0 193 73.6
PRCOL_00005481 Prasinoderma coloniale HOM05D004580 ORTHO05D005917 1.1e-69 268.1 344 43.3
MCO01G633 Micromonas commoda HOM05D004580 ORTHO05D005917 9.0e-69 265.0 302 44.4
FAN24G1342 Fragaria x ananassa HOM05D004580 ORTHO05D005917 1.9e-66 257.3 229 55.9
FvH4_2g11953 Fragaria vesca HOM05D004580 ORTHO05D000007 5.3e-61 239.2 221 53.8
Cfa021829 Carpinus fangiana HOM05D004580 ORTHO05D011646 6.5e-59 232.3 353 39.1
CDE05G0498 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 6.0e-57 225.7 228 52.6
Cfa001645 Carpinus fangiana HOM05D004580 ORTHO05D020348 1.2e-49 201.4 380 34.2
GSVIVG01009057001 Vitis vinifera HOM05D004580 ORTHO05D005917 2.9e-43 180.3 125 68.0
FAN24G1075 Fragaria x ananassa HOM05D004580 ORTHO05D005917 2.6e-31 140.6 148 49.3
Nn5g29558 Nelumbo nucifera HOM05D004580 ORTHO05D005917 3.2e-26 123.6 113 54.9
Cfa014845 Carpinus fangiana HOM05D000016 ORTHO05D000725 6.7e-24 115.9 105 54.3
Nn3g16512 Nelumbo nucifera HOM05D004580 ORTHO05D005917 3.7e-22 110.2 66 72.7
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 8.5e-19 99.0 57 75.4
unitig_8.g3591 Utricularia gibba HOM05D004580 ORTHO05D005917 5.0e-11 73.2 65 56.9
Nitab4.5_0006124g0020 Nicotiana tabacum HOM05D000011 ORTHO05D036898 7.5e-07 59.3 53 54.7


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