Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.1e-103 379.0 188 100.0
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 5.5e-88 327.8 165 98.2
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.4e-85 318.2 165 94.5
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 3.7e-76 288.5 163 89.6
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.1e-75 285.0 172 85.5
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.9e-73 278.9 162 86.4
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.4e-62 243.4 141 83.7
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.0e-62 241.9 139 86.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.7e-58 229.2 159 69.8
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 3.3e-56 222.2 168 66.1
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 4.3e-56 221.9 149 72.5
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 7.3e-56 221.1 152 74.3
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.6e-55 219.9 159 68.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 4.7e-55 218.4 167 66.5
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 6.1e-55 218.0 160 66.9
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 8.0e-55 217.6 165 66.1
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.4e-54 216.9 169 66.3
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.8e-54 216.5 168 64.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.0e-54 215.7 157 69.4
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 4.0e-54 215.3 165 65.5
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 5.2e-54 214.9 150 71.3
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 5.2e-54 214.9 178 61.2
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 5.2e-54 214.9 165 66.7
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 6.8e-54 214.5 143 71.3
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 2.0e-53 213.0 196 59.7
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.7e-52 209.9 183 60.7
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 1.7e-52 209.9 142 71.1
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.7e-52 209.9 162 61.7
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 2.2e-52 209.5 151 70.9
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 2.9e-52 209.1 160 66.9
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 2.9e-52 209.1 153 62.1
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 2.9e-52 209.1 157 65.0
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.9e-52 209.1 162 64.2
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 6.4e-52 208.0 156 66.0
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.1e-51 207.2 155 67.1
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.1e-51 207.2 139 70.5
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.4e-51 206.8 173 62.4
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 4.1e-51 205.3 161 62.1
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 4.1e-51 205.3 149 67.1
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 4.1e-51 205.3 160 64.4
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 5.4e-51 204.9 155 66.5
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 5.4e-51 204.9 151 68.2
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 5.4e-51 204.9 151 68.2
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 7.0e-51 204.5 150 65.3
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 7.0e-51 204.5 151 68.2
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 7.0e-51 204.5 159 64.8
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.0e-50 203.0 162 62.3
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.7e-50 202.6 148 63.5
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 3.5e-50 202.2 147 63.3
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.6e-50 201.8 148 62.2
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 4.6e-50 201.8 146 69.9
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 5.9e-50 201.4 147 68.0
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 5.9e-50 201.4 150 63.3
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.3e-49 200.3 159 64.8
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.3e-49 199.5 154 68.8
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.3e-49 199.5 158 62.0
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.0e-49 199.1 148 60.8
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 3.0e-49 199.1 174 58.6
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 6.6e-49 198.0 147 61.9
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 8.6e-49 197.6 151 62.3
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.1e-48 197.2 159 63.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.5e-48 196.1 148 62.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 3.3e-48 195.7 148 62.2
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 4.3e-48 195.3 211 50.7
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.2e-47 193.7 148 62.8
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.2e-47 193.7 164 60.4
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.2e-47 193.7 157 62.4
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.6e-47 193.4 194 53.6
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 2.1e-47 193.0 139 69.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 3.6e-47 192.2 148 61.5
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 8.0e-47 191.0 164 60.4
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.4e-46 190.3 147 68.0
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.4e-46 190.3 140 62.9
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 2.0e-45 186.4 129 68.2
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 4.4e-45 185.3 160 60.0
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.9e-44 182.6 155 60.6
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 4.9e-44 181.8 173 55.5
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 3.2e-43 179.1 154 58.4
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 9.2e-43 177.6 162 57.4
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 9.2e-43 177.6 141 61.0
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.2e-42 177.2 152 60.5
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.5e-40 170.2 147 55.8
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 4.3e-40 168.7 144 58.3
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 3.3e-32 142.5 131 56.5
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.6e-31 140.2 140 50.7
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.1e-30 136.0 109 56.9
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 6.0e-26 121.7 140 43.6
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 6.0e-26 121.7 74 81.1
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 6.6e-25 118.2 143 44.1
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 8.6e-25 117.9 107 54.2
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.6e-23 113.6 96 64.6
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.3e-17 94.0 71 60.6
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 7.3e-16 88.2 107 43.0
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.1e-14 84.3 63 60.3
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-13 80.5 76 55.3
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 4.5e-13 79.0 64 56.2
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 1.3e-12 77.4 76 53.9


User provided reference genes

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