Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 3.3e-223 778.1 406 100.0
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.3e-211 739.6 406 94.8
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 3.6e-209 731.5 406 94.6
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.3e-187 659.1 406 83.7
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 3.8e-187 658.3 406 83.7
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 8.0e-177 624.0 408 79.7
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 1.4e-168 596.7 406 77.3
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 2.9e-102 376.3 405 53.6
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 5.0e-102 375.6 409 52.1
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 7.2e-101 371.7 415 51.6
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.4e-99 367.5 410 52.2
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 1.5e-95 354.0 421 48.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 1.1e-93 347.8 414 48.6
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 1.9e-93 347.1 414 48.6
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 7.2e-93 345.1 369 51.8
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 4.7e-92 342.4 418 49.3
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 6.1e-92 342.0 419 50.1
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.0e-91 341.3 372 52.2
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.1e-90 337.8 390 49.5
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 2.0e-90 337.0 424 46.0
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 3.3e-90 336.3 372 50.5
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.3e-89 334.3 425 47.8
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.3e-89 334.3 413 49.4
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 1.7e-89 334.0 418 48.6
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 3.7e-89 332.8 387 49.4
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 4.8e-89 332.4 418 46.9
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 4.8e-89 332.4 363 52.1
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 6.3e-89 332.0 418 45.9
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 8.2e-89 331.6 394 48.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 1.1e-88 331.3 366 50.0
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 1.8e-88 330.5 371 48.2
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.4e-88 330.1 391 48.8
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 9.1e-88 328.2 391 48.6
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 4.5e-87 325.9 372 50.5
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 2.9e-86 323.2 416 46.9
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 5.0e-86 322.4 427 46.1
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 6.5e-86 322.0 424 44.6
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 6.5e-86 322.0 387 49.1
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 8.5e-86 321.6 412 46.4
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.1e-85 321.2 424 45.0
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 3.2e-85 319.7 423 48.0
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 4.2e-85 319.3 332 54.8
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.6e-84 317.4 364 51.4
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 1.6e-84 317.4 407 49.4
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 2.1e-84 317.0 418 46.2
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.8e-83 313.9 424 45.5
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 8.8e-83 311.6 361 49.3
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 1.5e-82 310.8 407 43.5
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.0e-82 310.5 417 43.9
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.6e-82 310.1 356 50.3
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 4.4e-82 309.3 355 49.3
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 5.7e-82 308.9 417 43.9
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 7.5e-82 308.5 360 49.7
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.1e-80 304.7 368 46.2
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.4e-80 304.3 365 49.0
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.8e-80 303.9 363 48.2
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 4.1e-80 302.8 364 45.1
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.2e-79 301.2 418 42.8
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.2e-79 301.2 380 45.5
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.2e-79 301.2 380 45.5
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 1.6e-79 300.8 416 42.3
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 3.5e-79 299.7 373 48.0
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.3e-78 297.7 348 48.6
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.3e-78 297.7 348 48.6
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.7e-78 297.4 348 48.9
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.8e-78 296.2 348 48.6
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 1.1e-77 294.7 348 48.6
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 2.7e-76 290.0 361 47.6
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 6.1e-76 288.9 389 44.5
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 2.3e-75 287.0 364 46.7
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.3e-75 287.0 375 46.4
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 6.8e-75 285.4 417 43.9
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 2.6e-74 283.5 353 44.8
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 5.7e-74 282.3 364 45.6
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 5.7e-74 282.3 364 45.6
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 5.7e-74 282.3 403 42.9
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 5.7e-74 282.3 328 49.1
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 9.8e-74 281.6 405 42.7
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 1.3e-73 281.2 376 44.7
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 2.2e-73 280.4 366 45.9
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 9.1e-72 275.0 410 42.0
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 7.2e-69 265.4 422 40.0
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 1.6e-68 264.2 363 42.1
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.6e-68 264.2 390 41.5
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 2.1e-68 263.8 345 43.5
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 2.1e-68 263.8 327 44.6
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 1.4e-67 261.2 373 42.4
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.8e-67 260.8 320 47.8
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 7.0e-64 248.8 311 50.2
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 4.3e-61 239.6 280 47.1
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 8.0e-60 235.3 301 44.9
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 6.8e-59 232.3 303 46.5
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.0e-58 230.7 359 42.9
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 1.4e-56 224.6 238 53.4
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 7.0e-56 222.2 382 38.7
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 7.8e-55 218.8 368 37.8
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 3.6e-52 209.9 365 39.5
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 4.7e-52 209.5 369 40.1
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.1e-46 189.5 241 48.1
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.1e-46 189.5 241 48.1
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 5.1e-38 162.9 272 38.6
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.2e-34 151.8 328 34.1
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 6.4e-33 146.0 237 38.4
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 7.8e-31 139.0 154 50.6
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.7e-30 137.9 125 58.4
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.7e-30 137.9 125 58.4
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 3.3e-29 133.7 386 28.8
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 3.1e-27 127.1 205 41.5
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.3e-27 126.3 239 38.5
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.3e-25 121.7 116 56.0
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 4.2e-24 116.7 129 45.7
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 5.4e-24 116.3 311 32.2
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 3.5e-23 113.6 164 42.1
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.3e-22 110.9 178 43.3
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.0e-18 97.8 132 47.0
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.7e-17 94.7 337 28.2
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 5.5e-08 63.2 266 25.6
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 1.8e-06 58.2 305 24.6


User provided reference genes

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