Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g005850.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 7.2e-34 148.7 296 100.0
Sopen01g001850 Solanum pennellii HOM05D000001 ORTHO05D010330 8.0e-33 145.2 284 99.6
CAN.G158.19 Capsicum annuum HOM05D000001 ORTHO05D010330 8.6e-19 98.6 105 75.2
CAN.G158.20 Capsicum annuum HOM05D000001 ORTHO05D010330 1.1e-18 98.2 104 76.9
Sopen01g001860 Solanum pennellii HOM05D000001 ORTHO05D010330 6.1e-17 92.4 78 92.3
Solyc03g082790.4 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.0e-16 90.1 49 89.8
Sopen03g022540 Solanum pennellii HOM05D000001 ORTHO05D010330 3.0e-16 90.1 49 89.8
Nitab4.5_0001059g0200 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.5e-15 87.8 50 88.0
PGSC0003DMG400032222 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.8e-13 80.9 50 84.0
Nitab4.5_0001105g0210 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.1e-13 80.1 101 49.5
PGSC0003DMG400025936 Solanum tuberosum HOM05D000001 ORTHO05D010330 7.0e-13 79.0 50 78.0
Nitab4.5_0008936g0030 Nicotiana tabacum HOM05D000001 ORTHO05D010330 9.2e-13 78.6 48 79.2
CAN.G606.45 Capsicum annuum HOM05D000001 ORTHO05D010330 1.6e-12 77.8 103 55.3
Nitab4.5_0001059g0250 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.6e-12 77.8 50 74.0
Nitab4.5_0001059g0230 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.0e-12 77.4 44 84.1
Nitab4.5_0007486g0060 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.0e-12 77.4 50 78.0
Nitab4.5_0005729g0100 Nicotiana tabacum HOM05D000001 ORTHO05D006702 2.7e-12 77.0 50 78.0
Solyc03g082770.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.5e-12 76.6 99 50.5
Nitab4.5_0001059g0210 Nicotiana tabacum HOM05D000001 ORTHO05D010330 7.8e-12 75.5 50 76.0
Nitab4.5_0007486g0050 Nicotiana tabacum HOM05D000001 ORTHO05D010330 7.8e-12 75.5 50 74.0
Nitab4.5_0001730g0150 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.3e-11 74.7 50 74.0
Nitab4.5_0001059g0220 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.3e-11 73.9 50 76.0
Peaxi162Scf00282g00035 Petunia axillaris HOM05D000001 ORTHO05D010330 3.8e-11 73.2 105 60.0
Nitab4.5_0008936g0020 Nicotiana tabacum HOM05D000001 ORTHO05D010330 8.6e-11 72.0 49 73.5
Peaxi162Scf01111g00014 Petunia axillaris HOM05D000001 ORTHO05D010330 8.6e-11 72.0 50 74.0
Nitab4.5_0003074g0010 Nicotiana tabacum HOM05D000001 ORTHO05D010330 4.3e-10 69.7 50 70.0
Peaxi162Scf00643g00059 Petunia axillaris HOM05D000001 ORTHO05D010330 5.6e-10 69.3 50 70.0
Nitab4.5_0002279g0110 Nicotiana tabacum HOM05D000001 ORTHO05D010330 7.3e-10 68.9 48 75.0
Nitab4.5_0009733g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000003 7.3e-10 68.9 50 76.0
Peaxi162Scf72209g00001 Petunia axillaris HOM05D000001 ORTHO05D010330 7.3e-10 68.9 50 74.0
Peaxi162Scf01049g00043 Petunia axillaris HOM05D000001 ORTHO05D010330 1.6e-09 67.8 50 72.0
Sopen03g022520 Solanum pennellii HOM05D000001 ORTHO05D010330 1.6e-09 67.8 50 74.0
Peaxi162Scf01049g00041 Petunia axillaris HOM05D000001 ORTHO05D010330 2.8e-09 67.0 50 72.0
Sopen01g001890 Solanum pennellii HOM05D000001 ORTHO05D010330 2.8e-09 67.0 50 72.0
Sopen01g041290 Solanum pennellii HOM05D000001 ORTHO05D010330 2.8e-09 67.0 50 68.0
CAN.G203.45 Capsicum annuum HOM05D000001 ORTHO05D010330 3.6e-09 66.6 50 70.0
Nitab4.5_0005441g0070 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.6e-09 66.6 50 74.0
PGSC0003DMG400022516 Solanum tuberosum HOM05D000001 ORTHO05D010330 3.6e-09 66.6 50 66.0
PGSC0003DMG400022518 Solanum tuberosum HOM05D000001 ORTHO05D010330 3.6e-09 66.6 50 66.0
Solyc01g097680.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.7e-09 66.2 50 68.0
Solyc01g097690.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.7e-09 66.2 50 68.0
Solyc01g097720.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.7e-09 66.2 50 68.0
CAN.G134.127 Capsicum annuum HOM05D000001 ORTHO05D010330 6.1e-09 65.9 100 61.0
Solyc01g097700.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 6.1e-09 65.9 50 66.0
Sopen01g041320 Solanum pennellii HOM05D000001 ORTHO05D010330 6.1e-09 65.9 100 63.0
PGSC0003DMG400019439 Solanum tuberosum HOM05D000001 ORTHO05D010330 6.1e-09 65.9 50 68.0
Peaxi162Scf00282g00132 Petunia axillaris HOM05D000001 ORTHO05D000003 8.0e-09 65.5 50 70.0
Sopen01g041300 Solanum pennellii HOM05D000001 ORTHO05D010330 8.0e-09 65.5 50 66.0
Sopen05g030810 Solanum pennellii HOM05D000001 ORTHO05D010330 1.0e-08 65.1 48 72.9
PGSC0003DMG400011652 Solanum tuberosum HOM05D000001 ORTHO05D395843 1.0e-08 65.1 49 71.4
Solyc01g005880.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.4e-08 64.7 50 70.0
Sopen01g041310 Solanum pennellii HOM05D000001 ORTHO05D010330 1.4e-08 64.7 50 66.0
CAN.G158.18 Capsicum annuum HOM05D000001 ORTHO05D010330 1.8e-08 64.3 86 52.3
CAN.G134.129 Capsicum annuum HOM05D000001 ORTHO05D010330 2.3e-08 63.9 100 60.0
Solyc01g097710.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.0e-08 63.5 50 64.0
CAN.G203.46 Capsicum annuum HOM05D000001 ORTHO05D010330 4.0e-08 63.2 50 66.0
Sopen01g041330 Solanum pennellii HOM05D000001 ORTHO05D010330 4.0e-08 63.2 50 64.0
PGSC0003DMG400032223 Solanum tuberosum HOM05D000001 ORTHO05D010330 6.8e-08 62.4 50 70.0
Peaxi162Scf01150g00024 Petunia axillaris HOM05D000001 ORTHO05D305764 8.9e-08 62.0 44 75.0
CAN.G134.128 Capsicum annuum HOM05D000001 ORTHO05D010330 1.5e-07 61.2 50 62.0
Nitab4.5_0003799g0040 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.5e-07 61.2 47 74.5
PGSC0003DMG400022514 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.5e-07 61.2 50 64.0
Peaxi162Scf00016g02742 Petunia axillaris HOM05D000001 ORTHO05D306469 2.0e-07 60.8 99 46.5
Peaxi162Scf00117g01732 Petunia axillaris HOM05D000001 ORTHO05D307068 2.0e-07 60.8 46 69.6
Peaxi162Scf00282g00015 Petunia axillaris HOM05D000001 ORTHO05D010330 2.0e-07 60.8 105 60.0
Nitab4.5_0000375g0170 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.4e-07 60.1 49 71.4
Sopen01g049480 Solanum pennellii HOM05D000001 ORTHO05D010330 4.4e-07 59.7 50 66.0
Solyc02g030220.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 5.7e-07 59.3 48 70.8
Peaxi162Scf00117g00178 Petunia axillaris HOM05D000001 ORTHO05D010330 7.5e-07 58.9 99 43.4
CAN.G134.130 Capsicum annuum HOM05D000001 ORTHO05D010330 9.8e-07 58.5 50 62.0
Peaxi162Scf01049g00008 Petunia axillaris HOM05D000001 ORTHO05D010330 1.7e-06 57.8 99 62.6


User provided reference genes

Program Settings