Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g005590.2 Solanum lycopersicum HOM05D004778 ORTHO05D005679 2.8e-20 101.3 62 100.0
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 1.4e-19 99.0 62 98.4
Nitab4.5_0012156g0030 Nicotiana tabacum HOM05D004778 ORTHO05D005679 4.9e-09 63.9 55 72.7
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 8.3e-09 63.2 62 66.1
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 3.2e-08 61.2 62 61.3
Cfa009564 Carpinus fangiana HOM05D004778 ORTHO05D005679 7.1e-08 60.1 62 59.7
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.2e-07 59.3 57 63.2
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 1.6e-07 58.9 62 61.3
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 1.6e-07 58.9 62 61.3
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 2.7e-07 58.2 62 59.7
Potri.003G220900 Populus trichocarpa HOM05D004778 ORTHO05D005679 2.7e-07 58.2 62 58.1
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 3.5e-07 57.8 62 58.1
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 3.5e-07 57.8 62 58.1
Gohir.D13G103100 Gossypium hirsutum HOM05D004778 ORTHO05D005679 4.6e-07 57.4 62 58.1
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 6.0e-07 57.0 62 59.7
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 6.0e-07 57.0 62 59.7
Nitab4.5_0000394g0080 Nicotiana tabacum HOM05D004778 ORTHO05D005679 7.8e-07 56.6 58 56.9
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.0e-06 56.2 62 54.8
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 1.3e-06 55.8 59 57.6
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 1.3e-06 55.8 62 58.1
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 1.7e-06 55.5 62 58.1
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 2.3e-06 55.1 61 59.0
Sabra03G0164400 Salix brachista HOM05D004778 ORTHO05D005679 2.3e-06 55.1 55 58.2
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 5.1e-06 53.9 62 54.8
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 5.1e-06 53.9 62 53.2
Solyc10g078580.1 Solanum lycopersicum HOM05D004778 ORTHO05D005679 5.1e-06 53.9 62 54.8
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 6.6e-06 53.5 62 54.8
CANSAT78G1478 Cannabis sativa HOM05D004778 ORTHO05D005679 8.6e-06 53.1 62 53.2
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 8.6e-06 53.1 62 54.8


User provided reference genes

Program Settings