Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g005420.2 Solanum lycopersicum HOM05D010939 ORTHO05D013055 1.2e-89 333.2 169 100.0
Sopen01g001430 Solanum pennellii HOM05D010939 ORTHO05D013055 2.0e-81 305.8 170 93.5
PGSC0003DMG400031548 Solanum tuberosum HOM05D010939 ORTHO05D013055 7.7e-65 250.8 168 77.4
CAN.G36.8 Capsicum annuum HOM05D010939 ORTHO05D013055 1.3e-56 223.4 176 65.9
CAN.G36.9 Capsicum annuum HOM05D010939 ORTHO05D013055 1.7e-48 196.4 162 64.8
Nitab4.5_0003936g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 3.9e-32 142.1 167 47.9
Nitab4.5_0007363g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.9e-31 139.8 172 47.1
Nitab4.5_0000757g0080 Nicotiana tabacum HOM05D010939 ORTHO05D013055 3.1e-29 132.5 171 49.1
Nitab4.5_0000238g0020 Nicotiana tabacum HOM05D010939 ORTHO05D013055 4.0e-29 132.1 164 47.6
Nitab4.5_0000757g0070 Nicotiana tabacum HOM05D010939 ORTHO05D013055 4.0e-29 132.1 171 49.1
CAN.G36.6 Capsicum annuum HOM05D010939 ORTHO05D013055 5.2e-29 131.7 142 54.9
Nitab4.5_0024229g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.2e-28 130.6 149 53.7
CAN.G36.7 Capsicum annuum HOM05D010939 ORTHO05D013055 9.8e-28 127.5 142 53.5
Peaxi162Scf00013g00055 Petunia axillaris HOM05D010939 ORTHO05D013055 1.1e-21 107.5 132 47.7
Peaxi162Scf00196g00224 Petunia axillaris HOM05D010939 ORTHO05D013055 3.4e-20 102.4 166 40.4
Nitab4.5_0000238g0030 Nicotiana tabacum HOM05D010939 ORTHO05D013055 9.8e-20 100.9 89 59.6
Peaxi162Scf00196g00211 Petunia axillaris HOM05D010939 ORTHO05D013055 2.9e-19 99.4 139 42.4
PGSC0003DMG400009734 Solanum tuberosum HOM05D010939 ORTHO05D013055 8.6e-16 87.8 64 68.8
Oeu030040.1 Olea europaea HOM05D000865 ORTHO05D000739 3.1e-13 79.3 100 45.0
Cc10_g10870 Coffea canephora HOM05D000865 ORTHO05D000739 4.0e-13 79.0 100 49.0
Cc10_g10850 Coffea canephora HOM05D000865 ORTHO05D000739 5.2e-13 78.6 100 49.0
Oeu017725.1 Olea europaea HOM05D000865 ORTHO05D000739 5.8e-12 75.1 143 39.9
SalBow7G1730 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.9e-11 72.8 102 42.2
SalBow7G3275 Salvia bowleyana HOM05D000865 ORTHO05D000739 8.3e-11 71.2 135 35.6
SalBow7G3635 Salvia bowleyana HOM05D000865 ORTHO05D000739 8.3e-11 71.2 102 42.2
Dinv27365 Davidia involucrata HOM05D000865 ORTHO05D000739 3.2e-10 69.3 100 43.0
Dinv27366 Davidia involucrata HOM05D000865 ORTHO05D000739 3.2e-10 69.3 100 43.0
Oeu017726.1 Olea europaea HOM05D000865 ORTHO05D000739 7.1e-10 68.2 143 37.8
SalBow7G1104 Salvia bowleyana HOM05D000865 ORTHO05D000739 7.1e-10 68.2 142 35.2
SalBow7G1310 Salvia bowleyana HOM05D000865 ORTHO05D000739 7.1e-10 68.2 142 35.2
Dinv27367 Davidia involucrata HOM05D000865 ORTHO05D000739 1.6e-09 67.0 100 41.0
Actinidia02602 Actinidia chinensis HOM05D000865 ORTHO05D000739 2.1e-09 66.6 100 43.0
Migut.N03304 Erythranthe guttata HOM05D000865 ORTHO05D000739 3.5e-09 65.9 102 39.2
Sopen11g008270 Solanum pennellii HOM05D000865 ORTHO05D000739 3.5e-09 65.9 151 35.1
ECA236G0710 Erigeron canadensis HOM05D000865 ORTHO05D000739 1.0e-08 64.3 100 44.0
Solyc11g013250.1 Solanum lycopersicum HOM05D000865 ORTHO05D000739 1.0e-08 64.3 151 34.4
Hma1.2p1_0009F.1_g006170 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 1.7e-08 63.5 135 36.3
Dinv27362 Davidia involucrata HOM05D000865 ORTHO05D000739 2.3e-08 63.2 117 37.6
Hma1.2p1_0009F.1_g006160 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 2.3e-08 63.2 151 34.4
Lj4g0012125 Lotus japonicus HOM05D000865 ORTHO05D000739 3.9e-08 62.4 98 34.7
SGA_v2.0_scaffold25G11102 Striga asiatica HOM05D000865 ORTHO05D000739 3.9e-08 62.4 154 31.8
CSS0024986 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 5.1e-08 62.0 100 41.0
Migut.N03310 Erythranthe guttata HOM05D000865 ORTHO05D000739 5.1e-08 62.0 118 34.7
HanXRQChr01g0027071 Helianthus annuus HOM05D000865 ORTHO05D000739 5.1e-08 62.0 100 41.0
CAN.G392.2 Capsicum annuum HOM05D000865 ORTHO05D000739 8.6e-08 61.2 151 33.1
Dinv27369 Davidia involucrata HOM05D000865 ORTHO05D000739 8.6e-08 61.2 100 41.0
Oeu030041.1 Olea europaea HOM05D000865 ORTHO05D000739 8.6e-08 61.2 95 40.0
Peaxi162Scf00028g00117 Petunia axillaris HOM05D000865 ORTHO05D000739 8.6e-08 61.2 101 39.6
SalBow7G2794 Salvia bowleyana HOM05D000865 ORTHO05D000739 8.6e-08 61.2 102 39.2
DCAR_014116 Daucus carota HOM05D000865 ORTHO05D000739 1.1e-07 60.8 100 41.0
Dinv27368 Davidia involucrata HOM05D000865 ORTHO05D000739 1.1e-07 60.8 101 40.6
Migut.N03306 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.1e-07 60.8 98 39.8
Lsat_1_v5_gn_8_103180 Lactuca sativa HOM05D000865 ORTHO05D000739 1.5e-07 60.5 100 41.0
SalBow7G1372 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.5e-07 60.5 102 39.2
Cc00_g25620 Coffea canephora HOM05D000865 ORTHO05D000739 1.9e-07 60.1 101 39.6
Phvul.003G104400 Phaseolus vulgaris HOM05D000865 ORTHO05D000739 1.9e-07 60.1 149 31.5
PGSC0003DMG400029026 Solanum tuberosum HOM05D000865 ORTHO05D000739 2.5e-07 59.7 152 34.9
CAN.G903.3 Capsicum annuum HOM05D000865 ORTHO05D000739 3.3e-07 59.3 151 32.5
GSVIVG01037484001 Vitis vinifera HOM05D000865 ORTHO05D000739 3.3e-07 59.3 99 41.4
Migut.C01169 Erythranthe guttata HOM05D000865 ORTHO05D000739 5.6e-07 58.5 101 37.6
Oeu050888.1 Olea europaea HOM05D000865 ORTHO05D000739 5.6e-07 58.5 105 37.1
Nitab4.5_0000051g0380 Nicotiana tabacum HOM05D000865 ORTHO05D000739 7.3e-07 58.2 151 33.8
VMungo1215G3134 Vigna mungo HOM05D000865 ORTHO05D000739 7.3e-07 58.2 149 31.5
Oeu030038.1 Olea europaea HOM05D000865 ORTHO05D000739 9.5e-07 57.8 95 40.0
SalBow7G0931 Salvia bowleyana HOM05D000865 ORTHO05D000739 9.5e-07 57.8 100 39.0
SalBow7G3084 Salvia bowleyana HOM05D000865 ORTHO05D000739 9.5e-07 57.8 100 39.0
Dinv27360 Davidia involucrata HOM05D000865 ORTHO05D000739 1.6e-06 57.0 96 40.6
Actinidia04740 Actinidia chinensis HOM05D000865 ORTHO05D000739 2.1e-06 56.6 100 35.0
Carub.0007s2588 Capsella rubella HOM05D000865 ORTHO05D000739 2.1e-06 56.6 144 32.6
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 2.1e-06 56.6 141 34.0
Rhsim11G0066200 Rhododendron simsii HOM05D000865 ORTHO05D000739 2.1e-06 56.6 100 41.0
SalBow6G3095 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.1e-06 56.6 99 38.4
CAN.G1652.15 Capsicum annuum HOM05D000865 ORTHO05D000739 2.8e-06 56.2 166 31.9
Actinidia14181 Actinidia chinensis HOM05D000865 ORTHO05D000739 4.7e-06 55.5 100 35.0
CANSAT54G1245 Cannabis sativa HOM05D000865 ORTHO05D000739 4.7e-06 55.5 100 39.0
TWI12G0020 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 4.7e-06 55.5 101 35.6
CANSAT25G3656 Cannabis sativa HOM05D000865 ORTHO05D000739 8.1e-06 54.7 98 34.7
PGSC0003DMG400031547 Solanum tuberosum HOM05D010939 ORTHO05D013055 8.1e-06 54.7 38 73.7


User provided reference genes

Program Settings