Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500377.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-168 596.3 275 100.0
Solyc04g075018.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-96 355.9 422 50.2
Solyc00g500269.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.5e-94 347.8 333 56.8
Solyc10g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-82 310.1 160 90.6
Solyc01g150105.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.3e-82 309.7 212 75.0
Solyc01g008473.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.5e-81 306.2 162 88.9
Solyc00g500283.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-78 296.6 245 64.5
Solyc09g098603.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.2e-76 289.3 199 72.9
Solyc05g006605.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.1e-76 288.9 205 70.7
Solyc09g005135.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.4e-71 273.1 161 80.7
Solyc05g004007.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.5e-67 259.2 212 63.2
Solyc10g086783.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.1e-66 255.4 240 56.7
Solyc01g009305.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-65 253.8 131 91.6
Sopen00g010810 Solanum pennellii HOM05D005671 ORTHO05D004497 9.6e-65 251.1 279 53.8
Solyc11g073315.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-64 250.4 241 56.8
Solyc01g004002.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.8e-64 248.8 295 51.9
Sopen00g013100 Solanum pennellii HOM05D005671 ORTHO05D004497 1.4e-63 247.3 228 60.1
Sopen00g011410 Solanum pennellii HOM05D005671 ORTHO05D004497 3.2e-60 236.1 224 58.5
Solyc04g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.2e-60 235.7 369 42.0
Sopen00g011750 Solanum pennellii HOM05D005671 ORTHO05D004497 9.3e-60 234.6 257 52.9
Solyc04g011333.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.9e-59 231.5 169 68.6
Solyc03g006715.2 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-58 230.7 233 55.8
Sopen09g030900 Solanum pennellii HOM05D005671 ORTHO05D004497 9.6e-57 224.6 275 50.5
Solyc09g009587.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-56 224.2 262 49.6
Solyc06g150122.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.6e-56 222.6 131 84.0
Solyc09g098604.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.8e-56 222.2 162 69.8
Solyc11g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-55 221.1 215 55.3
Solyc03g061653.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.0e-55 218.0 270 47.8
Sopen12g005340 Solanum pennellii HOM05D005671 ORTHO05D004497 5.8e-54 215.3 201 59.2
Solyc12g150102.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.9e-54 214.5 161 66.5
Sopen00g009060 Solanum pennellii HOM05D005671 ORTHO05D004497 1.9e-52 210.3 221 54.8
Sopen00g011000 Solanum pennellii HOM05D005671 ORTHO05D004497 4.2e-52 209.1 221 56.1
Sopen07g014500 Solanum pennellii HOM05D005671 ORTHO05D004497 4.2e-52 209.1 223 54.7
Solyc05g053133.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-51 207.2 162 65.4
Sopen11g001010 Solanum pennellii HOM05D005671 ORTHO05D004497 1.3e-50 204.1 241 52.7
Solyc08g007715.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.0e-50 203.0 128 78.1
Solyc00g500379.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.9e-50 202.6 159 67.9
Solyc06g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.9e-50 202.6 155 68.4
Solyc02g014876.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.7e-50 201.4 185 58.4
Sopen00g002980 Solanum pennellii HOM05D005671 ORTHO05D004497 1.9e-49 200.3 255 47.8
Sopen06g020570 Solanum pennellii HOM05D005671 ORTHO05D004497 4.3e-49 199.1 222 51.4
Solyc05g021415.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.1e-48 196.8 159 67.3
Sopen04g036640 Solanum pennellii HOM05D005671 ORTHO05D004497 3.7e-48 196.1 224 50.0
Solyc08g069238.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.4e-47 194.1 169 59.8
Solyc09g009173.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-47 193.7 174 58.0
Solyc00g500387.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-46 190.7 138 70.3
Sopen00g012720 Solanum pennellii HOM05D005671 ORTHO05D004497 2.6e-46 189.9 238 48.3
Solyc03g005393.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.9e-45 186.4 198 55.6
Solyc00g500246.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-44 184.5 244 47.1
Solyc09g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.9e-44 183.7 202 51.0
Solyc01g004008.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.5e-44 183.3 130 71.5
Solyc03g061657.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.0e-43 178.7 186 54.8
Solyc12g150128.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.7e-42 174.9 162 57.4
Solyc01g150104.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-41 174.5 88 88.6
Solyc12g098823.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-41 174.5 88 90.9
Sopen10g036190 Solanum pennellii HOM05D005671 ORTHO05D004497 1.5e-41 174.1 218 48.2
Solyc12g098827.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.9e-41 173.7 88 89.8
Solyc08g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.3e-41 172.9 105 81.9
Solyc12g100363.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.3e-41 172.6 240 42.9
Solyc01g008475.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.6e-41 171.4 115 74.8
Solyc03g006714.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-40 170.6 88 88.6
Solyc05g004003.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.1e-40 170.2 88 89.8
Solyc01g008477.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-40 169.9 88 89.8
Sopen00g012970 Solanum pennellii HOM05D005671 ORTHO05D004497 5.3e-39 165.6 215 47.0
Solyc03g005395.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.0e-39 164.9 90 86.7
Sopen00g007500 Solanum pennellii HOM05D005671 ORTHO05D004497 2.0e-38 163.7 218 45.4
Solyc01g004006.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.5e-38 162.5 105 78.1
Solyc03g006907.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.5e-38 162.5 84 89.3
Solyc08g069236.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.9e-38 162.2 88 86.4
Solyc08g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.6e-38 161.8 202 47.0
Solyc10g080782.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.6e-38 161.8 124 65.3
Solyc01g008479.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-37 161.4 162 53.7
Solyc01g150107.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-37 161.0 115 69.6
Solyc00g500270.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-36 157.9 107 72.0
Solyc08g069237.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.9e-36 157.1 107 73.8
Solyc04g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.5e-36 156.8 110 72.7
Solyc05g021405.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.2e-36 155.2 86 86.0
Solyc00g500356.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-35 154.1 252 40.9
Solyc04g064958.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.6e-35 152.5 108 71.3
Solyc07g049805.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-34 151.0 127 61.4
Solyc04g075014.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.1e-34 149.1 89 80.9
Sopen00g012730 Solanum pennellii HOM05D005671 ORTHO05D004497 2.5e-33 146.7 146 52.7
Solyc12g100367.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.3e-33 146.0 274 35.8
Solyc01g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.7e-33 144.8 214 45.3
Solyc03g006716.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.7e-33 144.8 72 91.7
Solyc00g500366.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.7e-32 142.9 108 65.7
Solyc03g006718.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.2e-32 141.7 81 85.2
Solyc03g124061.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-31 140.6 175 46.9
Solyc09g098607.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-29 134.0 211 40.3
Solyc04g064956.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-29 133.7 170 48.2
Solyc09g009734.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.9e-29 133.3 78 79.5
Solyc00g500235.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.8e-29 132.9 77 80.5
Solyc03g004007.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.5e-29 131.7 65 90.8
Solyc03g006712.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.9e-28 130.6 64 90.6
Solyc01g150106.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.2e-28 129.8 104 62.5
Solyc06g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.5e-28 129.0 156 49.4
Sopen07g026870 Solanum pennellii HOM05D000061 ORTHO05D000050 5.5e-28 129.0 66 87.9
Solyc07g007335.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.2e-28 128.6 128 51.6
Solyc00g500122.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.1e-26 122.5 107 61.7
Solyc05g053137.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.7e-26 122.1 107 58.9
Solyc00g500282.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-24 117.9 197 40.6
Solyc09g098605.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-24 117.1 106 56.6
Solyc05g150105.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-24 116.7 107 56.1
Solyc09g098606.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.8e-24 115.9 208 36.1
Solyc02g014871.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-23 114.0 146 45.9
Solyc08g006255.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.1e-23 113.2 52 96.2
Solyc00g500367.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.1e-23 112.8 208 36.1
Solyc03g033295.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.3e-23 112.5 104 54.8
Solyc12g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.9e-23 112.1 67 77.6
Solyc08g006257.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.2e-22 111.3 52 92.3
Solyc09g076053.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-22 111.3 129 48.8
Solyc12g150129.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-22 110.9 136 46.3
Solyc00g500120.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-22 110.2 208 35.1
Solyc09g098608.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-22 110.2 208 35.1
Solyc00g500386.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.0e-21 105.9 65 76.9
Solyc00g500385.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-19 101.3 164 40.9
Solyc10g086787.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.7e-19 99.4 52 86.5
Solyc10g086785.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.4e-18 97.8 109 52.3
PGSC0003DMG400012108 Solanum tuberosum HOM05D005671 ORTHO05D004497 2.3e-18 97.1 128 44.5
Solyc00g500180.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.0e-18 96.7 88 60.2
Solyc03g026418.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.8e-16 89.4 41 95.1
Solyc11g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.8e-16 89.4 162 41.4
Solyc00g500121.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-13 80.9 74 55.4
Solyc03g006365.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-13 80.9 65 61.5
Solyc04g075012.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-13 80.5 66 62.1
Solyc05g021410.3 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.7e-11 72.8 47 76.6
Solyc09g008087.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.3e-10 70.5 33 90.9
Solyc09g009583.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-09 67.8 71 52.1
Solyc12g150130.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-08 63.9 28 92.9
Solyc03g006903.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.3e-07 59.3 29 89.7


User provided reference genes

Program Settings