Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500363.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 4.5e-39 164.1 81 100.0
Lalb_Chr00c21g0405211 Lupinus albus HOM05D007099 ORTHO05D009081 8.6e-30 133.3 101 73.3
Lalb_Chr00c21g0405401 Lupinus albus HOM05D007099 ORTHO05D009081 8.6e-30 133.3 101 73.3
Lalb_Chr00c24g0407161 Lupinus albus HOM05D007099 ORTHO05D009081 8.6e-30 133.3 101 73.3
Lj2P1221T100 Lonicera japonica HOM05D007099 ORTHO05D009081 1.1e-29 132.9 101 71.3
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 2.5e-29 131.7 101 70.3
THA.LOC104825605 Tarenaya hassleriana HOM05D007099 ORTHO05D009081 1.2e-28 129.4 101 71.3
VMungo0647G1684 Vigna mungo HOM05D007099 ORTHO05D009081 6.1e-28 127.1 101 70.3
COL.COLO4_06718 Corchorus olitorius HOM05D007099 ORTHO05D009081 2.3e-27 125.2 101 65.3
TPR.G27292 Trifolium pratense HOM05D007099 ORTHO05D009081 2.0e-26 122.1 71 87.3
Glyma.05G091932 Glycine max HOM05D007099 ORTHO05D009081 2.6e-26 121.7 101 67.3
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 1.3e-25 119.4 100 67.0
Solyc09g050030.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 1.7e-25 119.0 63 93.7
Nn1g10177 Nelumbo nucifera HOM05D007099 ORTHO05D009081 4.9e-25 117.5 63 92.1
Lalb_Chr11g0070131 Lupinus albus HOM05D007099 ORTHO05D009081 2.4e-24 115.2 63 92.1
Lalb_Chr11g0070211 Lupinus albus HOM05D007099 ORTHO05D009081 2.4e-24 115.2 63 92.1
Rhsim11G0096700 Rhododendron simsii HOM05D007099 ORTHO05D009081 4.1e-24 114.4 100 59.0
AL4G30490 Arabidopsis lyrata HOM05D007099 ORTHO05D009081 2.0e-23 112.1 71 74.6
AT2G34520 Arabidopsis thaliana HOM05D007099 ORTHO05D009081 4.6e-23 110.9 71 74.6
Aa31LG1G28210 Aethionema arabicum HOM05D007099 ORTHO05D009081 5.9e-23 110.5 100 61.0
Carub.0004s1619 Capsella rubella HOM05D007099 ORTHO05D009081 7.8e-23 110.2 71 73.2
Thhalv10017324m.g Eutrema salsugineum HOM05D007099 ORTHO05D009081 1.7e-22 109.0 71 73.2
CARHR128610 Cardamine hirsuta HOM05D007099 ORTHO05D009081 2.3e-22 108.6 71 69.0
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 2.3e-22 108.6 101 57.4
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 3.0e-22 108.2 101 55.4
CAN.G371.64 Capsicum annuum HOM05D007099 ORTHO05D009081 3.9e-22 107.8 69 71.0
Sp4g16780 Schrenkiella parvula HOM05D007099 ORTHO05D009081 5.0e-22 107.5 71 71.8
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 6.6e-22 107.1 90 67.8
Nitab4.5_0000068g0330 Nicotiana tabacum HOM05D007099 ORTHO05D009081 6.6e-22 107.1 96 55.2
Nitab4.5_0012613g0010 Nicotiana tabacum HOM05D007099 ORTHO05D009081 6.6e-22 107.1 96 55.2
BcaB02g09535 Brassica carinata HOM05D007099 ORTHO05D009081 1.1e-21 106.3 71 70.4
BcaB06g28779 Brassica carinata HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
A04p26440 Brassica napus HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
A05p11160 Brassica napus HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
C04p63850 Brassica napus HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
BolC4t27852H Brassica oleracea HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
BraA04t18148Z Brassica rapa HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
BraA05t20062Z Brassica rapa HOM05D007099 ORTHO05D009081 1.5e-21 105.9 71 70.4
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 1.5e-21 105.9 64 85.9
Zm00001eb261270 Zea mays HOM05D002252 ORTHO05D002451 1.9e-21 105.5 101 55.4
Cc11_g04750 Coffea canephora HOM05D007099 ORTHO05D009081 2.5e-21 105.1 71 67.6
BcaC02g11514 Brassica carinata HOM05D007099 ORTHO05D009081 4.3e-21 104.4 71 69.0
C04p14510 Brassica napus HOM05D007099 ORTHO05D009081 4.3e-21 104.4 71 69.0
BolC4t23034H Brassica oleracea HOM05D007099 ORTHO05D009081 4.3e-21 104.4 71 69.0
Solyc04g079380.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 4.3e-21 104.4 69 68.1
Sopen04g032990 Solanum pennellii HOM05D007099 ORTHO05D009081 4.3e-21 104.4 69 68.1
PGSC0003DMG400007997 Solanum tuberosum HOM05D007099 ORTHO05D009081 4.3e-21 104.4 69 68.1
CsaV3_2G032930 Cucumis sativus L. HOM05D007099 ORTHO05D009081 7.3e-21 103.6 69 66.7
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 1.2e-20 102.8 99 53.5
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 1.2e-20 102.8 99 52.5
MELO3C019879.2 Cucumis melo HOM05D007099 ORTHO05D009081 1.6e-20 102.4 69 66.7
Gorai.001G161900 Gossypium raimondii HOM05D007099 ORTHO05D009081 1.6e-20 102.4 83 68.7
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 2.1e-20 102.1 101 52.5
Atru.chr1.3070 Acer truncatum HOM05D007099 ORTHO05D009081 2.8e-20 101.7 101 53.5
Atru.chr3.1047 Acer truncatum HOM05D007099 ORTHO05D009081 2.8e-20 101.7 101 53.5
CiPaw.13G036200 Carya illinoinensis HOM05D007099 ORTHO05D009081 3.6e-20 101.3 99 52.5
MD07G1070600 Malus domestica HOM05D007099 ORTHO05D009081 8.0e-20 100.1 99 54.5
arahy.Tifrunner.gnm1.ann1.BT1F12 Arachis hypogaea HOM05D007099 ORTHO05D009081 1.1e-19 99.8 62 85.5
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 1.1e-19 99.8 92 63.0
HanXRQChr10g0308131 Helianthus annuus HOM05D007099 ORTHO05D009081 1.1e-19 99.8 101 51.5
Lsat_1_v5_gn_9_15021 Lactuca sativa HOM05D007099 ORTHO05D009081 1.1e-19 99.8 101 52.5
MD03G1252400 Malus domestica HOM05D007099 ORTHO05D009081 1.1e-19 99.8 99 54.5
MD07G1069700 Malus domestica HOM05D007099 ORTHO05D009081 1.1e-19 99.8 98 54.1
Prupe.2G087000 Prunus persica HOM05D007099 ORTHO05D009081 1.1e-19 99.8 99 55.6
Prupe.2G087700 Prunus persica HOM05D007099 ORTHO05D009081 1.1e-19 99.8 99 55.6
Prupe.8G094900 Prunus persica HOM05D007099 ORTHO05D009081 1.1e-19 99.8 99 55.6
Cfa011223 Carpinus fangiana HOM05D007099 ORTHO05D009081 1.8e-19 99.0 71 64.8
PSO541G4216 Papaver somniferum HOM05D007099 ORTHO05D009081 3.1e-19 98.2 99 52.5
Manes.15G073400 Manihot esculenta HOM05D007099 ORTHO05D009081 4.0e-19 97.8 71 64.8
Ciclev10022860m.g Citrus clementina HOM05D007099 ORTHO05D009081 5.2e-19 97.4 101 50.5
PSO675G8234 Papaver somniferum HOM05D007099 ORTHO05D009081 6.8e-19 97.1 99 51.5
SalBow8G2603 Salvia bowleyana HOM05D007099 ORTHO05D009081 6.8e-19 97.1 71 66.2
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 8.9e-19 96.7 70 70.0
PSO541G5582 Papaver somniferum HOM05D007099 ORTHO05D009081 1.2e-18 96.3 99 51.5
Cfa011224 Carpinus fangiana HOM05D007099 ORTHO05D009081 1.5e-18 95.9 71 63.4
Haze_02608 Corylus avellana HOM05D007099 ORTHO05D009081 1.5e-18 95.9 71 63.4
QL04p041158 Quercus lobata HOM05D007099 ORTHO05D009081 1.5e-18 95.9 70 61.4
Potri.001G424950 Populus trichocarpa HOM05D007099 ORTHO05D009081 2.0e-18 95.5 99 50.5
Sabra16G0287600 Salix brachista HOM05D007099 ORTHO05D009081 2.0e-18 95.5 99 50.5
RcHm_v2.0_Chr1g0333591 Rosa chinensis HOM05D007099 ORTHO05D009081 2.6e-18 95.1 71 63.4
AUR62006089 Chenopodium quinoa HOM05D007099 ORTHO05D009081 5.8e-18 94.0 71 62.0
AUR62019404 Chenopodium quinoa HOM05D007099 ORTHO05D009081 5.8e-18 94.0 71 62.0
Peaxi162Scf01092g00115 Petunia axillaris HOM05D007099 ORTHO05D009081 7.5e-18 93.6 60 71.7
DCAR_014524 Daucus carota HOM05D007099 ORTHO05D009081 9.8e-18 93.2 100 49.0
RcHm_v2.0_Chr5g0056441 Rosa chinensis HOM05D007099 ORTHO05D009081 1.3e-17 92.8 71 62.0
FAN16G1526 Fragaria x ananassa HOM05D007099 ORTHO05D009081 1.7e-17 92.4 70 60.0
QL10p027581 Quercus lobata HOM05D007099 ORTHO05D009081 1.7e-17 92.4 70 58.6
SHI18971 Sapria himalayana HOM05D007099 ORTHO05D009081 1.7e-17 92.4 71 59.2
CANSAT56G2898 Cannabis sativa HOM05D007099 ORTHO05D009081 2.9e-17 91.7 69 59.4
FvH4_7g06080 Fragaria vesca HOM05D007099 ORTHO05D009081 3.7e-17 91.3 71 59.2
PSO675G5170 Papaver somniferum HOM05D007099 ORTHO05D009081 3.7e-17 91.3 99 51.5
FAN06G3861 Fragaria x ananassa HOM05D007099 ORTHO05D009081 4.9e-17 90.9 70 58.6
FAN10G1031 Fragaria x ananassa HOM05D007099 ORTHO05D009081 4.9e-17 90.9 70 58.6
FAN12G2091 Fragaria x ananassa HOM05D007099 ORTHO05D009081 3.2e-16 88.2 69 59.4
Ah.07g205590 Amaranthus hybridus HOM05D007099 ORTHO05D009081 4.1e-16 87.8 66 60.6
Rhsim10G0009600 Rhododendron simsii HOM05D000071 ORTHO05D000029 4.1e-16 87.8 58 72.4
BcaB02g09534 Brassica carinata HOM05D007099 ORTHO05D009081 7.0e-16 87.0 60 66.7
Phvul.011G109300 Phaseolus vulgaris HOM05D007099 ORTHO05D009081 7.0e-16 87.0 68 70.6
Mapoly0991s0001 Marchantia polymorpha HOM05D007099 ORTHO05D009081 9.2e-16 86.7 56 75.0
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 1.2e-15 86.3 49 85.7
Gohir.A01G126800 Gossypium hirsutum HOM05D007099 ORTHO05D009081 1.0e-14 83.2 46 89.1
ECA234G1703 Erigeron canadensis HOM05D007099 ORTHO05D009081 1.3e-14 82.8 87 48.3
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 1.7e-14 82.4 46 87.0
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 5.6e-13 77.4 44 86.4
SMO134G0293 Selaginella moellendorffii HOM05D007099 ORTHO05D009081 4.7e-12 74.3 68 55.9
Pp3c2_23460 Physcomitrium patens HOM05D007099 ORTHO05D009081 4.0e-11 71.2 53 62.3
ClCG01G010070 Citrullus lanatus HOM05D007099 ORTHO05D009081 6.8e-11 70.5 52 63.5
Peaxi162Scf44104g00001 Petunia axillaris HOM05D007099 ORTHO05D009081 1.2e-10 69.7 36 91.7
FvH4_3g30490 Fragaria vesca HOM05D007099 ORTHO05D009081 2.6e-10 68.6 54 59.3
FAN11G0918 Fragaria x ananassa HOM05D007099 ORTHO05D009081 2.6e-10 68.6 54 59.3
Cre17.g726300 Chlamydomonas reinhardtii HOM05D007099 ORTHO05D009081 1.0e-06 56.6 65 46.2
arahy.Tifrunner.gnm1.ann1.HLYH4Q Arachis hypogaea HOM05D007099 ORTHO05D009081 1.7e-06 55.8 69 50.7


User provided reference genes

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