Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 5.2e-109 397.9 224 100.0
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 5.2e-109 397.9 224 100.0
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 5.2e-109 397.9 224 100.0
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 5.2e-109 397.9 224 100.0
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 2.8e-107 392.1 228 95.2
Solyc05g045930.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 8.5e-19 98.2 56 85.7
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 3.3e-15 86.3 62 69.4
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 4.3e-15 85.9 139 36.0
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 7.4e-15 85.1 118 37.3
Solyc05g045870.2 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.3e-14 84.3 54 77.8
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 4.8e-14 82.4 126 38.9
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 8.2e-14 81.6 108 38.9
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 3.1e-13 79.7 107 39.3
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 5.3e-13 79.0 146 34.9
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 5.3e-13 79.0 146 34.9
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 6.9e-13 78.6 140 35.7
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 9.0e-13 78.2 139 36.0
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 1.2e-12 77.8 139 39.6
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 2.6e-12 76.6 116 35.3
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 7.7e-12 75.1 36 100.0
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 7.7e-12 75.1 113 41.6
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 1.7e-11 73.9 111 36.9
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 1.7e-11 73.9 111 36.9
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.9e-11 73.2 128 35.9
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 2.9e-11 73.2 128 35.9
Solyc12g035825.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.9e-11 73.2 52 71.2
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.8e-11 72.8 128 35.9
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 6.5e-11 72.0 118 34.7
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 2.5e-10 70.1 108 37.0
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 4.2e-10 69.3 111 38.7
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 4.2e-10 69.3 111 38.7
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 4.2e-10 69.3 111 38.7
Ca_25385_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013491 4.2e-10 69.3 108 37.0
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 9.4e-10 68.2 144 31.2
Solyc09g015880.4 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-09 67.0 32 100.0
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 2.7e-09 66.6 107 35.5
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 1.8e-08 63.9 136 30.9
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 1.1e-07 61.2 110 34.5
TPR.G35117 Trifolium pratense HOM05D009000 ORTHO05D010659 1.1e-07 61.2 106 37.7
Peaxi162Scf01967g00002 Petunia axillaris HOM05D015862 ORTHO05D010659 2.6e-07 60.1 84 41.7
Peaxi162Scf02507g00003 Petunia axillaris HOM05D015862 ORTHO05D010659 2.6e-07 60.1 84 41.7
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 3.3e-07 59.7 120 32.5
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 4.4e-07 59.3 107 35.5
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 2.8e-06 56.6 79 40.5


User provided reference genes

Program Settings