Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500259.1 Solanum lycopersicum HOM05D008855 ORTHO05D011808 4.3e-147 525.0 348 100.0
Nitab4.5_0001127g0290 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.3e-55 221.1 217 58.1
Peaxi162Scf00456g00031 Petunia axillaris HOM05D008855 ORTHO05D011808 2.3e-47 193.7 185 61.1
Nitab4.5_0001152g0990 Nicotiana tabacum HOM05D008855 ORTHO05D011808 3.0e-47 193.4 160 66.2
Nitab4.5_0002406g0050 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.3e-45 188.0 184 58.2
Nitab4.5_0000172g0400 Nicotiana tabacum HOM05D008855 ORTHO05D011808 3.8e-42 176.4 167 59.9
Nitab4.5_0001152g0340 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.6e-37 161.0 157 58.6
Nitab4.5_0000014g0110 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.8e-31 141.0 168 51.2
Nitab4.5_0001152g0790 Nicotiana tabacum HOM05D008855 ORTHO05D011808 3.0e-31 140.2 151 55.0
Nitab4.5_0000393g0120 Nicotiana tabacum HOM05D008855 ORTHO05D011808 2.4e-28 130.6 112 63.4
CAN.G505.11 Capsicum annuum HOM05D008855 ORTHO05D011808 5.5e-25 119.4 85 71.8
Solyc00g500409.1 Solanum lycopersicum HOM05D008855 ORTHO05D012896 1.2e-24 118.2 199 41.2
Nitab4.5_0000172g1120 Nicotiana tabacum HOM05D008855 ORTHO05D011808 7.9e-24 115.5 71 84.5
Solyc00g500234.1 Solanum lycopersicum HOM05D008855 ORTHO05D012896 1.7e-18 97.8 46 100.0
Sopen00g001740 Solanum pennellii HOM05D008855 ORTHO05D012896 6.5e-18 95.9 48 93.8
Nitab4.5_0000172g0290 Nicotiana tabacum HOM05D008855 ORTHO05D011808 2.5e-17 94.0 88 58.0
Nitab4.5_0002554g0020 Nicotiana tabacum HOM05D008855 ORTHO05D011808 2.5e-17 94.0 89 60.7
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 3.6e-16 90.1 44 97.7
Sopen00g002240 Solanum pennellii HOM05D000691 ORTHO05D000378 3.6e-16 90.1 44 97.7
Sopen00g013680 Solanum pennellii HOM05D008855 ORTHO05D012896 4.7e-16 89.7 48 89.6
Sopen06g010060 Solanum pennellii HOM05D008855 ORTHO05D012896 8.0e-16 89.0 48 89.6
Sopen00g014390 Solanum pennellii HOM05D008855 ORTHO05D012896 6.7e-15 85.9 48 87.5
Nitab4.5_0002739g0200 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.5e-14 84.7 86 55.8
Sopen00g002060 Solanum pennellii HOM05D008855 ORTHO05D012896 2.0e-14 84.3 46 87.0
Sopen00g002160 Solanum pennellii HOM05D008855 ORTHO05D012896 2.0e-14 84.3 46 87.0
Sopen00g006730 Solanum pennellii HOM05D003608 ORTHO05D012896 7.5e-14 82.4 43 90.7
Sopen00g002320 Solanum pennellii HOM05D008855 ORTHO05D030629 9.7e-14 82.0 189 36.0
Sopen00g010360 Solanum pennellii HOM05D001275 ORTHO05D012896 1.7e-13 81.3 48 81.2
Solyc00g112190.2 Solanum lycopersicum HOM05D008855 ORTHO05D011808 8.2e-13 79.0 37 97.3
Sopen00g006980 Solanum pennellii HOM05D001275 ORTHO05D001570 8.2e-13 79.0 222 32.0
Sopen07g009420 Solanum pennellii HOM05D001275 ORTHO05D001570 8.2e-13 79.0 48 83.3
Sopen00g001700 Solanum pennellii HOM05D001275 ORTHO05D012896 1.4e-12 78.2 39 94.9
Sopen00g014150 Solanum pennellii HOM05D008855 ORTHO05D012896 1.4e-12 78.2 44 84.1
Sopen00g004140 Solanum pennellii HOM05D001029 ORTHO05D394494 1.8e-12 77.8 46 80.4
Sopen00g004810 Solanum pennellii HOM05D000691 ORTHO05D000378 5.3e-12 76.3 48 79.2
Sopen00g005200 Solanum pennellii HOM05D001275 ORTHO05D012896 5.3e-12 76.3 212 32.1
Nitab4.5_0000478g0030 Nicotiana tabacum HOM05D008855 ORTHO05D011808 9.1e-12 75.5 38 94.7
Sopen06g010050 Solanum pennellii HOM05D001029 ORTHO05D000917 9.1e-12 75.5 212 32.1
Sopen00g004040 Solanum pennellii HOM05D001275 ORTHO05D001570 1.2e-11 75.1 39 92.3
Nitab4.5_0006085g0050 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.6e-11 74.7 37 91.9
Sopen00g003830 Solanum pennellii HOM05D015191 ORTHO05D012896 5.9e-11 72.8 45 77.8
Nitab4.5_0000172g1170 Nicotiana tabacum HOM05D008855 ORTHO05D011808 2.2e-10 70.9 42 81.0
Sopen00g005120 Solanum pennellii HOM05D000691 ORTHO05D000378 2.2e-10 70.9 44 79.5
Nitab4.5_0001486g0020 Nicotiana tabacum HOM05D008855 ORTHO05D011808 2.9e-10 70.5 37 94.6
Sopen00g011180 Solanum pennellii HOM05D008855 ORTHO05D012896 5.0e-10 69.7 40 82.5
Solyc00g500308.1 Solanum lycopersicum HOM05D008855 ORTHO05D390690 6.5e-10 69.3 46 78.3
Sopen00g011490 Solanum pennellii HOM05D001275 ORTHO05D012896 1.1e-09 68.6 41 82.9
Sopen00g001410 Solanum pennellii HOM05D008855 ORTHO05D012896 3.2e-09 67.0 44 75.0
Sopen00g001420 Solanum pennellii HOM05D001275 ORTHO05D001570 3.2e-09 67.0 38 84.2
Sopen00g002210 Solanum pennellii HOM05D000920 ORTHO05D004854 3.2e-09 67.0 38 84.2
Sopen00g006720 Solanum pennellii HOM05D001275 ORTHO05D012896 3.2e-09 67.0 38 84.2
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 3.2e-09 67.0 38 84.2
Solyc11g051176.1 Solanum lycopersicum HOM05D001275 ORTHO05D001570 2.1e-08 64.3 41 75.6
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-08 63.5 38 84.2
Nitab4.5_0000172g0360 Nicotiana tabacum HOM05D008855 ORTHO05D011808 1.8e-07 61.2 30 93.3
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 1.8e-07 61.2 38 78.9
Sopen00g001790 Solanum pennellii HOM05D001275 ORTHO05D001570 6.8e-07 59.3 39 76.9
Sopen00g001430 Solanum pennellii HOM05D002490 ORTHO05D012896 2.6e-06 57.4 44 68.2
Sopen07g009530 Solanum pennellii HOM05D003608 ORTHO05D000917 4.4e-06 56.6 32 81.2
PGSC0003DMG400034813 Solanum tuberosum HOM05D001828 ORTHO05D001745 9.8e-06 55.5 33 72.7


User provided reference genes

Program Settings