Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500220.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.0e-79 299.3 175 100.0
Solyc00g011660.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 3.5e-60 235.3 170 81.2
Solyc03g043580.3 Solanum lycopersicum HOM05D000395 ORTHO05D010235 3.5e-60 235.3 170 80.6
Sopen00g003940 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-60 234.6 170 80.0
Solyc00g500092.1 Solanum lycopersicum HOM05D000395 ORTHO05D010235 7.5e-55 217.6 163 71.2
Solyc00g500219.1 Solanum lycopersicum HOM05D000395 ORTHO05D010235 7.5e-55 217.6 163 71.2
Solyc03g036477.2 Solanum lycopersicum HOM05D000395 ORTHO05D010235 7.5e-55 217.6 163 71.2
Solyc00g500097.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.2e-54 216.1 166 77.1
PGSC0003DMG400002785 Solanum tuberosum HOM05D000395 ORTHO05D010235 1.0e-40 170.6 180 58.9
Sopen03g007420 Solanum pennellii HOM05D009106 ORTHO05D010235 1.3e-38 163.7 136 79.4
Solyc00g500222.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.6e-36 156.8 96 84.4
Solyc03g042500.1 Solanum lycopersicum HOM05D000395 ORTHO05D000088 3.3e-34 149.1 133 69.9
Solyc00g500093.1 Solanum lycopersicum HOM05D000395 ORTHO05D000088 7.3e-26 121.3 121 57.9
PGSC0003DMG400040663 Solanum tuberosum HOM05D000395 ORTHO05D010235 8.1e-25 117.9 199 43.2
Solyc01g015210.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.3e-24 116.3 163 50.9
Sopen00g004350 Solanum pennellii HOM05D000395 ORTHO05D000088 6.0e-20 101.7 89 76.4
Solyc11g045450.3 Solanum lycopersicum HOM05D000395 ORTHO05D010235 4.3e-18 95.5 193 40.9
Sopen02g015540 Solanum pennellii HOM05D000395 ORTHO05D000088 9.5e-18 94.4 85 74.1
Sopen03g007470 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-17 93.6 108 63.0
Sopen11g021070 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-16 90.1 163 47.2
Solyc00g500221.1 Solanum lycopersicum HOM05D000395 ORTHO05D000088 5.8e-15 85.1 44 93.2
Sopen05g014200 Solanum pennellii HOM05D000395 ORTHO05D000088 3.7e-14 82.4 49 77.6
Sopen02g015560 Solanum pennellii HOM05D000395 ORTHO05D000088 1.1e-13 80.9 49 79.6
PGSC0003DMG400045041 Solanum tuberosum HOM05D009106 ORTHO05D010235 2.8e-09 66.2 67 50.7
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 3.6e-09 65.9 70 50.0
Solyc01g034190.1 Solanum lycopersicum HOM05D000395 ORTHO05D000088 6.2e-09 65.1 49 67.3
Solyc05g017730.1 Solanum lycopersicum HOM05D009106 ORTHO05D000088 2.4e-08 63.2 70 67.1
Peaxi162Scf00234g00222 Petunia axillaris HOM05D009106 ORTHO05D010235 3.1e-08 62.8 51 52.9
Nitab4.5_0000806g0040 Nicotiana tabacum HOM05D009106 ORTHO05D010235 2.0e-07 60.1 58 44.8
Nitab4.5_0005238g0010 Nicotiana tabacum HOM05D009106 ORTHO05D010235 2.6e-07 59.7 67 41.8
Solyc02g081780.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 3.4e-07 59.3 48 52.1
Sopen01g007270 Solanum pennellii HOM05D000395 ORTHO05D000088 4.4e-07 58.9 39 74.4
Solyc01g013995.2 Solanum lycopersicum HOM05D000395 ORTHO05D000088 1.3e-06 57.4 112 48.2
Solyc02g065340.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.3e-06 57.4 54 46.3
Sopen02g026380 Solanum pennellii HOM05D009106 ORTHO05D010235 3.8e-06 55.8 47 48.9
Peaxi162Scf01198g00214 Petunia axillaris HOM05D009106 ORTHO05D010235 4.9e-06 55.5 52 50.0


User provided reference genes

Program Settings