Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.3e-101 371.7 186 100.0
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.3e-101 371.7 186 100.0
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.3e-101 371.7 186 100.0
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.3e-101 371.7 186 100.0
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 6.9e-91 337.4 185 93.5
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 6.9e-91 337.4 185 93.5
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 3.2e-88 328.6 176 94.9
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 9.3e-88 327.0 176 94.9
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 1.2e-87 326.6 176 94.9
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 3.0e-86 322.0 175 93.1
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 5.1e-86 321.2 176 93.2
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 5.1e-86 321.2 176 93.2
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 5.1e-86 321.2 176 93.8
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 5.6e-85 317.8 176 92.6
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 7.4e-85 317.4 176 92.6
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 9.6e-85 317.0 176 92.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 9.6e-85 317.0 175 92.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 9.6e-85 317.0 175 92.0
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 1.3e-84 316.6 174 92.5
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 1.3e-84 316.6 176 92.0
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.4e-82 308.5 172 91.3
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.1e-77 293.5 153 96.7
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 1.6e-76 289.7 171 86.0
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.8e-76 288.9 153 96.1
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.2e-74 283.5 158 90.5
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.5e-74 283.1 159 90.6
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.0e-73 280.4 153 93.5
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 1.0e-73 280.4 153 94.1
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.8e-73 278.5 153 93.5
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 6.5e-73 277.7 176 83.0
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 6.5e-73 277.7 176 83.0
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 1.1e-72 276.9 148 94.6
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 7.9e-71 270.8 150 92.7
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 7.9e-71 270.8 176 81.8
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 1.3e-68 263.5 148 91.2
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.5e-66 256.5 175 76.0
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 1.7e-65 253.1 134 94.0
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 3.2e-64 248.8 141 91.5
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 1.5e-58 229.9 163 76.1
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.7e-57 226.5 153 80.4
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 3.2e-56 222.2 153 79.7
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 2.4e-51 206.1 116 91.4
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.6e-45 186.0 111 86.5
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 7.0e-35 151.4 89 91.0
BolSC28t60438H Brassica oleracea HOM05D003666 ORTHO05D004770 3.5e-34 149.1 76 94.7
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 9.4e-32 141.0 163 54.6
BolC6t36214H Brassica oleracea HOM05D003666 ORTHO05D004770 4.0e-30 135.6 125 60.0
SEGI_23011 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.8e-27 126.7 95 67.4
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 2.9e-25 119.4 70 90.0
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 2.5e-24 116.3 71 84.5
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 8.0e-23 111.3 69 84.1
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 4.0e-22 109.0 65 89.2
TPR.G32909 Trifolium pratense HOM05D003666 ORTHO05D004770 1.5e-21 107.1 65 81.5
arahy.Tifrunner.gnm1.ann1.W0GCEN Arachis hypogaea HOM05D003666 ORTHO05D004770 2.0e-18 96.7 59 89.8
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 2.0e-18 96.7 61 83.6
Solyc10g045750.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.5e-18 95.9 69 76.8
SHI15675 Sapria himalayana HOM05D003666 ORTHO05D004770 1.9e-16 90.1 157 42.7
SHI04382 Sapria himalayana HOM05D003666 ORTHO05D004770 1.4e-14 84.0 51 76.5
Phvul.L002937 Phaseolus vulgaris HOM05D003666 ORTHO05D004770 2.6e-13 79.7 62 71.0
Nitab4.5_0001291g0020 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.4e-13 79.3 61 70.5
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 9.2e-11 71.2 42 90.5
SHI21046 Sapria himalayana HOM05D003666 ORTHO05D004770 1.6e-10 70.5 37 86.5
SHI36048 Sapria himalayana HOM05D003666 ORTHO05D004770 1.3e-09 67.4 38 81.6
SHI36047 Sapria himalayana HOM05D003666 ORTHO05D004770 8.6e-09 64.7 41 78.0
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 2.1e-07 60.1 131 38.2
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 1.8e-06 57.0 48 70.8
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 5.2e-06 55.5 48 68.8


User provided reference genes

Program Settings