Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500038.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
Solyc00g500045.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
Solyc00g500082.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
Solyc00g500127.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
Solyc00g500197.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
Solyc00g500300.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
Solyc00g500326.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.8e-37 157.5 72 100.0
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 2.9e-21 104.8 47 97.9
Solyc11g018700.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.9e-21 104.8 47 97.9
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 1.1e-20 102.8 47 95.7
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 5.5e-20 100.5 47 93.6
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 9.3e-20 99.8 47 93.6
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 2.7e-19 98.2 47 91.5
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 2.7e-19 98.2 47 91.5
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 6.1e-19 97.1 48 87.5
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 7.9e-19 96.7 47 91.5
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 1.3e-18 95.9 47 89.4
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.0e-18 94.7 47 85.1
Migut.L00537 Erythranthe guttata HOM05D008299 ORTHO05D010400 3.9e-18 94.4 47 87.2
Solyc01g017150.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.1e-17 92.8 46 87.0
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 2.5e-17 91.7 47 89.4
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.4e-17 90.1 47 85.1
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 7.7e-14 80.1 47 74.5
Solyc03g058240.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 5.0e-13 77.4 47 74.5
RcHm_v2.0_Chr5g0051131 Rosa chinensis HOM05D008299 ORTHO05D010400 3.3e-09 64.7 31 83.9
RcHm_v2.0_CPg0501791 Rosa chinensis HOM05D008299 ORTHO05D010400 3.3e-09 64.7 31 83.9
RcHm_v2.0_CPg0502621 Rosa chinensis HOM05D008299 ORTHO05D010400 3.3e-09 64.7 31 83.9
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.8e-07 58.9 35 74.3
ClCG00G002340 Citrullus lanatus HOM05D008299 ORTHO05D010400 1.2e-06 56.2 27 85.2
Potri.019G028450 Populus trichocarpa HOM05D008299 ORTHO05D010400 7.7e-06 53.5 30 83.3


User provided reference genes

Program Settings