Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500116.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 1.9e-89 332.4 163 100.0
Solyc00g500099.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 6.2e-88 327.4 163 98.2
Solyc00g500272.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 6.2e-88 327.4 163 98.2
Solyc00g500318.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 6.2e-88 327.4 163 98.2
Solyc00g500361.1 Solanum lycopersicum HOM05D001325 ORTHO05D011137 8.1e-88 327.0 162 98.1
PGSC0003DMG400034591 Solanum tuberosum HOM05D009131 ORTHO05D011137 1.3e-74 283.1 155 89.0
PGSC0003DMG402008771 Solanum tuberosum HOM05D009131 ORTHO05D011137 1.3e-74 283.1 155 89.0
Solyc00g500170.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 3.6e-67 258.5 150 86.7
Solyc02g085520.4 Solanum lycopersicum HOM05D003478 ORTHO05D004196 9.4e-36 154.1 95 80.0
Sopen00g005760 Solanum pennellii HOM05D009131 ORTHO05D030617 2.7e-35 152.5 75 97.3
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 7.5e-33 144.4 154 52.6
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 7.5e-33 144.4 154 52.6
BolSC28t60388H Brassica oleracea HOM05D009131 ORTHO05D011137 1.3e-29 133.7 149 49.0
CAN.G1109.13 Capsicum annuum HOM05D009131 ORTHO05D011137 1.3e-29 133.7 109 63.3
CAN.G1167.18 Capsicum annuum HOM05D009131 ORTHO05D011137 8.6e-29 131.0 109 62.4
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 1.5e-28 130.2 151 50.3
SGA_v2.0_scaffold477G52170 Striga asiatica HOM05D009131 ORTHO05D011137 9.5e-28 127.5 157 46.5
Lj2P1230T116 Lonicera japonica HOM05D009131 ORTHO05D011137 6.1e-27 124.8 157 45.9
A04p09520 Brassica napus HOM05D009131 ORTHO05D011137 5.7e-25 118.2 130 50.0
LjContig00315g0007090 Lotus japonicus HOM05D009131 ORTHO05D011137 1.3e-24 117.1 150 42.7
LjContig00439g0010199 Lotus japonicus HOM05D009131 ORTHO05D011137 1.3e-24 117.1 150 42.7
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 1.3e-24 117.1 113 53.1
CAN.G950.4 Capsicum annuum HOM05D009131 ORTHO05D011137 2.8e-24 115.9 148 45.9
CARHR287230 Cardamine hirsuta HOM05D009131 ORTHO05D011137 1.1e-23 114.0 142 48.6
Lsat_1_v5_gn_1_2620 Lactuca sativa HOM05D009131 ORTHO05D011137 1.1e-23 114.0 139 46.8
Lsat_1_v5_gn_7_25441 Lactuca sativa HOM05D009131 ORTHO05D011137 1.1e-23 114.0 139 46.8
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 2.7e-22 109.4 166 37.3
PGR028G0024 Punica granatum HOM05D009131 ORTHO05D011137 3.5e-22 109.0 153 40.5
PGR069G0015 Punica granatum HOM05D009131 ORTHO05D011137 3.5e-22 109.0 153 40.5
PGR069G0016 Punica granatum HOM05D009131 ORTHO05D011137 3.5e-22 109.0 153 40.5
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 3.5e-22 109.0 153 40.5
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.8e-22 107.8 127 45.7
Ah.03g144220 Amaranthus hybridus HOM05D009131 ORTHO05D011137 1.3e-21 107.1 172 36.0
CAN.G1923.1 Capsicum annuum HOM05D009131 ORTHO05D011137 1.3e-21 107.1 71 76.1
HanXRQMTg0579611 Helianthus annuus HOM05D009131 ORTHO05D011137 6.6e-21 104.8 146 41.8
Lsat_1_v5_gn_5_16481 Lactuca sativa HOM05D009131 ORTHO05D011137 1.5e-20 103.6 106 51.9
MELO3C027715.2 Cucumis melo HOM05D000743 ORTHO05D011137 2.1e-19 99.8 149 39.6
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 6.1e-19 98.2 157 36.3
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 6.8e-18 94.7 136 41.9
unitig_87.g27976 Utricularia gibba HOM05D009131 ORTHO05D011137 7.0e-15 84.7 141 37.6
CsaV3_UNG208200 Cucumis sativus L. HOM05D009131 ORTHO05D011137 2.1e-11 73.2 152 35.5
CAN.G85.18 Capsicum annuum HOM05D009131 ORTHO05D011137 2.3e-10 69.7 35 91.4
Dinv06715 Davidia involucrata HOM05D006320 ORTHO05D007069 1.5e-09 67.0 110 33.6
Eucgr.I01853 Eucalyptus grandis HOM05D009131 ORTHO05D011137 5.4e-07 58.5 60 50.0
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 9.2e-07 57.8 73 42.5


User provided reference genes

Program Settings