Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Solyc00g047200.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Solyc00g500240.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Solyc00g500364.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Sopen01g028720 Solanum pennellii HOM05D002864 ORTHO05D007972 3.0e-40 167.9 78 100.0
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 6.7e-40 166.8 78 98.7
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 6.7e-40 166.8 78 98.7
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 6.7e-40 166.8 78 98.7
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 6.7e-40 166.8 78 98.7
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 6.7e-40 166.8 78 98.7
Sp3g25700 Schrenkiella parvula HOM05D002864 ORTHO05D007972 6.7e-40 166.8 78 98.7
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 5.7e-39 163.7 78 96.2
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 9.7e-39 162.9 78 97.4
CAN.G1077.1 Capsicum annuum HOM05D002864 ORTHO05D007972 2.2e-38 161.8 78 97.4
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 2.8e-38 161.4 78 94.9
Lj2C1221T24 Lonicera japonica HOM05D002864 ORTHO05D007972 1.1e-37 159.5 78 96.2
Hma1.2p1_0484F.1_g162980 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 1.4e-37 159.1 77 96.1
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 5.3e-37 157.1 78 94.9
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 5.3e-37 157.1 78 94.9
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 5.3e-37 157.1 78 94.9
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 5.3e-37 157.1 78 94.9
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 2.6e-36 154.8 78 94.9
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 2.6e-36 154.8 78 94.9
Lsat_1_v5_gn_0_44400 Lactuca sativa HOM05D002864 ORTHO05D007972 5.9e-36 153.7 74 97.3
Lalb_Chr10g0094511 Lupinus albus HOM05D002864 ORTHO05D007972 7.7e-36 153.3 78 93.6
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 1.0e-35 152.9 73 95.9
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 1.0e-35 152.9 73 95.9
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 1.7e-35 152.1 74 94.6
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 2.2e-35 151.8 78 89.7
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 2.2e-35 151.8 78 89.7
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 2.2e-35 151.8 75 93.3
Glyma.07G122200 Glycine max HOM05D002864 ORTHO05D007972 2.9e-35 151.4 75 94.7
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 8.5e-35 149.8 75 94.7
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 8.5e-35 149.8 75 94.7
arahy.Tifrunner.gnm1.ann1.76QWAA Arachis hypogaea HOM05D002864 ORTHO05D007972 1.9e-34 148.7 73 95.9
arahy.Tifrunner.gnm1.ann1.BSNJ2C Arachis hypogaea HOM05D002864 ORTHO05D007972 1.9e-34 148.7 73 95.9
arahy.Tifrunner.gnm1.ann1.L9JJXJ Arachis hypogaea HOM05D002864 ORTHO05D007972 1.9e-34 148.7 73 95.9
arahy.Tifrunner.gnm1.ann1.N2KMKI Arachis hypogaea HOM05D002864 ORTHO05D007972 1.9e-34 148.7 73 95.9
HanXRQChr00c0055g0571421 Helianthus annuus HOM05D002864 ORTHO05D007972 7.2e-34 146.7 77 88.3
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 7.2e-34 146.7 77 88.3
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 9.4e-34 146.4 74 90.5
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 2.7e-33 144.8 70 95.7
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 3.6e-33 144.4 71 91.5
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 5.2e-32 140.6 72 90.3
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 5.2e-32 140.6 72 90.3
Zm00001eb434710 Zea mays HOM05D002864 ORTHO05D007972 5.2e-32 140.6 72 90.3
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 5.2e-32 140.6 72 90.3
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 5.2e-32 140.6 72 90.3
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 5.2e-32 140.6 72 90.3
Lalb_Chr11g0070191 Lupinus albus HOM05D002864 ORTHO05D007972 2.6e-31 138.3 71 91.5
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 8.3e-30 133.3 78 83.3
Nitab4.5_0000120g0110 Nicotiana tabacum HOM05D002864 ORTHO05D007972 8.3e-30 133.3 73 86.3
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 6.1e-25 117.1 58 94.8
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 1.8e-24 115.5 68 80.9
CAN.G502.16 Capsicum annuum HOM05D002864 ORTHO05D007972 2.3e-24 115.2 60 88.3
Nitab4.5_0024895g0020 Nicotiana tabacum HOM05D002864 ORTHO05D007972 2.6e-23 111.7 62 83.9
Aqoxy12s036 Aquilegia oxysepala HOM05D002864 ORTHO05D007972 4.4e-23 110.9 58 89.7
CAN.G1082.1 Capsicum annuum HOM05D002864 ORTHO05D007972 4.4e-23 110.9 60 86.7
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 5.7e-23 110.5 72 73.6
HanXRQChr16g0504981 Helianthus annuus HOM05D002864 ORTHO05D007972 2.8e-22 108.2 57 89.5
Hund28112 Selenicereus undatus HOM05D002864 ORTHO05D007972 4.5e-20 100.9 51 92.2
SEGI_39586 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 6.8e-16 87.0 70 55.7
SHI26669 Sapria himalayana HOM05D002864 ORTHO05D007972 1.1e-13 79.7 51 74.5
SEGI_40151 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.7e-11 72.4 47 68.1
HanXRQChr17g0558551 Helianthus annuus HOM05D002864 ORTHO05D007972 3.9e-11 71.2 36 86.1
SEGI_20307 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 3.9e-11 71.2 46 67.4
BraSC177t45745Z Brassica rapa HOM05D002864 ORTHO05D007972 4.3e-10 67.8 30 96.7
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 3.1e-08 61.6 29 96.6
Haze_27081 Corylus avellana HOM05D002864 ORTHO05D007972 3.4e-07 58.2 73 35.6


User provided reference genes

Program Settings