Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 8.4e-93 343.6 162 100.0
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 8.4e-93 343.6 162 100.0
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 1.6e-83 312.8 162 92.0
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 3.3e-81 305.1 157 91.7
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 2.4e-79 298.9 157 89.2
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.9e-79 297.4 160 88.1
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 9.9e-78 293.5 157 88.5
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 1.7e-77 292.7 160 88.8
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 7.4e-73 277.3 150 88.0
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 3.8e-69 265.0 151 84.1
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 1.5e-65 253.1 132 90.2
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 1.3e-64 250.0 137 86.1
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 1.8e-63 246.1 135 87.4
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 1.2e-62 243.4 168 76.8
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 1.2e-62 243.4 168 76.8
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 1.5e-62 243.0 125 92.0
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 2.0e-62 242.7 135 86.7
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 2.0e-62 242.7 135 86.7
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 1.3e-61 240.0 125 91.2
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.3e-58 229.2 122 88.5
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 1.5e-57 226.5 165 73.3
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 4.8e-56 221.5 123 87.0
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 6.9e-55 217.6 135 78.5
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 1.2e-54 216.9 109 94.5
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 1.7e-53 213.0 105 96.2
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 3.5e-51 205.3 99 96.0
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 7.4e-49 197.6 145 72.4
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 2.8e-48 195.7 102 89.2
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 2.6e-46 189.1 97 89.7
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 8.5e-45 184.1 98 87.8
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 1.4e-44 183.3 156 63.5
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 2.1e-43 179.5 99 87.9
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 7.9e-43 177.6 105 81.9
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 2.0e-41 172.9 101 82.2
arahy.Tifrunner.gnm1.ann1.2DSY3L Arachis hypogaea HOM05D005210 ORTHO05D010286 4.5e-30 135.2 107 66.4
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 1.5e-28 130.2 105 69.5
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 3.2e-28 129.0 130 61.5
TPR.G28261 Trifolium pratense HOM05D005210 ORTHO05D010286 4.0e-26 122.1 65 89.2
Glyma.12G155200 Glycine max HOM05D005210 ORTHO05D010286 2.2e-24 116.3 65 86.2
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 4.1e-23 112.1 101 59.4
Oeu002130.1 Olea europaea HOM05D005210 ORTHO05D010286 2.7e-22 109.4 101 61.4
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 9.4e-20 100.9 62 80.6
TPR.G24723 Trifolium pratense HOM05D005210 ORTHO05D010286 3.6e-19 99.0 107 51.4
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 8.8e-18 94.4 103 50.5
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 2.0e-17 93.2 57 78.9
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 5.9e-14 81.6 53 73.6
Phvul.011G104800 Phaseolus vulgaris HOM05D005210 ORTHO05D010286 6.5e-13 78.2 49 73.5
SHI11895 Sapria himalayana HOM05D005210 ORTHO05D010286 2.1e-11 73.2 62 62.9
Peaxi162Scf01120g00002 Petunia axillaris HOM05D008814 ORTHO05D010812 3.4e-09 65.9 107 44.9
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-08 63.2 59 57.6
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-08 63.2 59 57.6
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-08 63.2 59 57.6
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 4.9e-08 62.0 30 93.3
Peaxi162Scf00700g00729 Petunia axillaris HOM05D001102 ORTHO05D001018 1.2e-06 57.4 42 64.3
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 4.5e-06 55.5 44 59.1


User provided reference genes

Program Settings