Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.3e-94 347.1 177 100.0
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-74 283.5 174 84.5
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 1.4e-72 276.6 145 97.9
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 8.3e-70 267.3 142 96.5
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 4.1e-69 265.0 135 100.0
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.0e-69 264.2 145 93.8
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.0e-69 264.2 145 93.8
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 7.0e-69 264.2 145 93.8
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 7.0e-69 264.2 139 97.1
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 7.0e-69 264.2 143 95.1
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 7.8e-68 260.8 132 100.0
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 7.8e-68 260.8 132 100.0
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 1.3e-67 260.0 135 98.5
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.7e-67 259.6 141 94.3
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.0e-67 258.8 141 94.3
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 8.6e-67 257.3 139 95.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 1.5e-66 256.5 143 93.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 1.5e-66 256.5 143 93.0
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 1.9e-66 256.1 141 93.6
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 1.9e-66 256.1 141 93.6
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 3.3e-66 255.4 142 92.3
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 7.3e-66 254.2 132 97.0
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 4.7e-65 251.5 135 95.6
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-64 250.4 139 92.8
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.4e-64 250.0 135 94.8
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.4e-64 250.0 135 94.8
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 1.4e-64 250.0 138 93.5
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 3.1e-64 248.8 135 94.8
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 3.1e-64 248.8 135 94.8
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.2e-63 246.9 135 94.1
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 2.0e-63 246.1 133 94.7
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 2.0e-63 246.1 139 92.1
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 9.8e-63 243.8 139 90.6
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 9.2e-61 237.3 137 89.8
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.6e-60 236.5 129 93.8
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.6e-60 236.5 200 66.5
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 1.7e-59 233.0 135 90.4
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 3.6e-57 225.3 131 89.3
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 5.2e-56 221.5 134 84.3
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.0e-55 219.5 143 79.7
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.0e-55 219.5 143 79.7
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 2.6e-55 219.2 127 89.8
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 4.3e-50 201.8 122 84.4
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 5.2e-48 194.9 104 96.2
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 6.8e-48 194.5 109 91.7
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 2.6e-47 192.6 113 89.4
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 9.9e-47 190.7 106 93.4
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 4.9e-46 188.3 96 100.0
Nitab4.5_0001788g0230 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-45 187.2 100 97.0
TPR.G18511 Trifolium pratense HOM05D003666 ORTHO05D004770 5.4e-37 158.3 94 87.2
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 9.3e-37 157.5 84 92.9
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 2.7e-36 156.0 81 97.5
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 3.9e-35 152.1 99 82.8
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 3.9e-35 152.1 84 92.9
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 1.6e-33 146.7 84 89.3
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 1.6e-33 146.7 95 83.2
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 4.0e-32 142.1 102 81.4
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 4.5e-31 138.7 231 42.0
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 1.2e-28 130.6 139 58.3
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 3.5e-28 129.0 74 89.2
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 4.6e-28 128.6 136 48.5
Peaxi162Scf00147g00311 Petunia axillaris HOM05D003666 ORTHO05D004770 1.0e-27 127.5 65 98.5
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 1.2e-20 104.0 141 48.9
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 2.7e-20 102.8 140 40.7
Oeu022812.1 Olea europaea HOM05D003666 ORTHO05D004770 2.4e-16 89.7 71 73.2
Lalb_Chr00c54g0413571 Lupinus albus HOM05D003666 ORTHO05D004770 5.3e-16 88.6 48 91.7
MELO3C030345.2 Cucumis melo HOM05D003666 ORTHO05D004770 1.5e-15 87.0 55 85.5
Solyc10g062000.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.6e-15 86.3 53 79.2
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 2.5e-13 79.7 109 39.4
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 3.2e-13 79.3 40 90.0
SEGI_03857 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 7.9e-12 74.7 60 68.3
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 1.1e-10 70.9 147 33.3
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.1e-10 70.9 147 33.3
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 4.3e-10 68.9 147 32.0
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 4.3e-10 68.9 147 31.3
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 7.4e-10 68.2 147 31.3
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 7.4e-10 68.2 147 31.3
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 7.4e-10 68.2 147 31.3
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 9.7e-10 67.8 148 29.1
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 9.7e-10 67.8 148 29.1
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 9.7e-10 67.8 148 29.1
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 9.7e-10 67.8 150 30.7
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 9.7e-10 67.8 150 30.7
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.2e-09 66.6 150 30.0
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 2.2e-09 66.6 150 30.0
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 2.8e-09 66.2 117 34.2
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.8e-09 66.2 153 32.7
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 3.7e-09 65.9 78 47.4
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 6.3e-09 65.1 148 29.7
Gorai.001G166500 Gossypium raimondii HOM05D019106 ORTHO05D019781 1.1e-08 64.3 36 83.3
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.1e-08 64.3 147 30.6
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 1.4e-08 63.9 147 29.9
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 2.4e-08 63.2 108 36.1
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 3.1e-08 62.8 147 29.9
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 4.1e-08 62.4 144 29.2
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 5.3e-08 62.0 144 28.5
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 6.9e-08 61.6 108 32.4
Solyc10g045765.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 9.0e-08 61.2 35 77.1
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.5e-07 60.5 117 30.8
SHI01159 Sapria himalayana HOM05D003666 ORTHO05D004770 1.5e-07 60.5 55 58.2
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 2.0e-07 60.1 108 31.5
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-07 60.1 77 37.7
Gohir.A08G103600 Gossypium hirsutum HOM05D019106 ORTHO05D019781 2.6e-07 59.7 36 83.3
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 5.9e-07 58.5 72 38.9
SHI15673 Sapria himalayana HOM05D003666 ORTHO05D004770 5.9e-07 58.5 99 40.4
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 7.7e-07 58.2 151 27.2
QL93p0790_0012 Quercus lobata HOM05D003666 ORTHO05D004770 1.3e-06 57.4 109 38.5
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 2.2e-06 56.6 108 30.6
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 2.9e-06 56.2 77 33.8
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.9e-06 56.2 77 33.8
Phvul.009G130900 Phaseolus vulgaris HOM05D019106 ORTHO05D019781 2.9e-06 56.2 36 72.2
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.5e-06 55.1 71 39.4
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 8.5e-06 54.7 108 30.6


User provided reference genes

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